RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PTH1RQ03431 593 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 NOSTRINQ8IVI9 506 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 TCP10L2B9ZVM9 353 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 MAP3K9P80192 1104 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 UBXN1Q04323 297 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 PHKBQ93100 1093 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 MAGEF1Q9HAY2 307 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 KIFC2Q96AC6 838 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 MRVI1Q9Y6F6 885 aa18.78■□□□□ 0.6
PCDHA13-202ENST00000409494 KIAA0753Q2KHM9 967 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 NCAPH2Q6IBW4 605 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 CCDC91Q7Z6B0 441 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 RGS12O14924 1447 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 SOS2Q07890 1332 aaPredicted RBP18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 CABP7Q86V35 215 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 PPP1R9BQ96SB3 815 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 CCDC94Q9BW85 323 aaPredicted RBP18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 CENPHQ9H3R5 247 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 SRP68Q9UHB9 627 aaKnown RBP18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 SLC8A3P57103 927 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 ADALQ6DHV7 355 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 ARMC9Q7Z3E5 817 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 TTC14Q96N46 770 aa18.77■□□□□ 0.6
PCDHA13-202ENST00000409494 FSD2A1L4K1 749 aa18.77■□□□□ 0.59
PCDHA13-202ENST00000409494 GAS7O60861 476 aa18.77■□□□□ 0.59
PCDHA13-202ENST00000409494 CSRNP1Q96S65 589 aa18.77■□□□□ 0.59
PCDHA13-202ENST00000409494 ZHX1Q9UKY1 873 aaPredicted RBP18.77■□□□□ 0.59
PCDHA13-202ENST00000409494 TUBBP07437 444 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 NEK8Q86SG6 692 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 BRIP1Q9BX63 1249 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 USP32Q8NFA0 1604 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 ME3Q16798 604 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 MYL10Q9BUA6 226 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 MACROD2A1Z1Q3 448 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 M0QZ92 97 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 GCFC2P16383 781 aaKnown RBP18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 TXNRD1Q16881 649 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 BBXQ8WY36 941 aaPredicted RBP18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 SUGT1Q9Y2Z0 365 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 CD163L1Q9NR16 1453 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
PCDHA13-202ENST00000409494 JADE2Q9NQC1 790 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 GNA14O95837 355 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 FAM173BQ6P4H8 233 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 GOLGA5Q8TBA6 731 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 SPATA31A1Q5TZJ5 1347 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 CCDC169A6NNP5 214 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 POLR2DO15514 142 aaKnown RBP18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 ZNF202O95125 648 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 IGKV5-2P06315 115 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 USH1GQ495M9 461 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 VPS54Q9P1Q0 977 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 SP4Q02446 784 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 HERC4Q5GLZ8 1057 aaPredicted RBP18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 FAM160B2Q86V87 743 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 TSGA10Q9BZW7 698 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 PREX1Q8TCU6 1659 aa18.75■□□□□ 0.59
PCDHA13-202ENST00000409494 LIFRP42702 1097 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 CCDC84Q86UT8 332 aaPredicted RBP18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 GAS2L3Q86XJ1 694 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 PLA2G12BQ9BX93 195 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 NUCKS1Q9H1E3 243 aaKnown RBP18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 RASAL2Q9UJF2 1139 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 IFFO1Q0D2I5 559 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 PAK1Q13153 545 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 SEC62Q99442 399 aaKnown RBP18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 OSBPP22059 807 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 IFNKQ9P0W0 207 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 HSP90AA4PQ58FG1 418 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 FAM182BQ5T319 152 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 TAX1BP1Q86VP1 789 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 TRIML1Q8N9V2 468 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 SLC17A8Q8NDX2 589 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 CDHR1Q96JP9 859 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 CUEDC2Q9H467 287 aa18.74■□□□□ 0.59
PCDHA13-202ENST00000409494 SASH1O94885 1247 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 TBC1D8BQ0IIM8 1120 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 PKP1Q13835 747 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 ARHGEF16Q5VV41 709 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 NOC4LQ9BVI4 516 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 PRPF4BQ13523 1007 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 CHMP2AO43633 222 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 NLRP12P59046 1061 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 MIER3Q7Z3K6 550 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 ARHGEF1Q92888 912 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 JPH2Q9BR39 696 aaPredicted RBP18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 ZSWIM4Q9H7M6 989 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 PCDHB13Q9Y5F0 798 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 PDIA3P30101 505 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 HLFQ16534 295 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 DGKHQ86XP1 1220 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 CSGALNACT2Q8N6G5 542 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 NOX5Q96PH1 765 aa18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 FOXP1Q9H334 677 aaPredicted RBP18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 ADD3Q9UEY8 706 aaKnown RBP18.73■□□□□ 0.59
PCDHA13-202ENST00000409494 CPDO75976 1380 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 ALAS1P13196 640 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 GTF2F1P35269 517 aaKnown RBP eCLIP18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 EXOC8Q8IYI6 725 aa18.72■□□□□ 0.59
PCDHA13-202ENST00000409494 PALD1Q9ULE6 856 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms