RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MATR3P43243 847 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL6A2-204ENST00000409416 ARID5AQ03989 594 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 BIN2Q9UBW5 565 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-204ENST00000409416 TFR2Q9UP52 801 aa15.17■□□□□ 0.02
COL6A2-204ENST00000409416 SIPA1L3O60292 1781 aaPredicted RBP15.16■□□□□ 0.02
COL6A2-204ENST00000409416 BMP6P22004 513 aa15.16■□□□□ 0.02
COL6A2-204ENST00000409416 TNNI2P48788 182 aa15.16■□□□□ 0.02
COL6A2-204ENST00000409416 NAPAP54920 295 aa15.16■□□□□ 0.02
COL6A2-204ENST00000409416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.16■□□□□ 0.021e-7■■■■■ 115.4
COL6A2-204ENST00000409416 DEXIO95424 95 aa15.16■□□□□ 0.02
COL6A2-204ENST00000409416 MMP1P03956 469 aa15.16■□□□□ 0.02
COL6A2-204ENST00000409416 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
COL6A2-204ENST00000409416 BMS1Q14692 1282 aaKnown RBP15.16■□□□□ 0.02
COL6A2-204ENST00000409416 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
COL6A2-204ENST00000409416 HSD3B7Q9H2F3 369 aa15.16■□□□□ 0.02
COL6A2-204ENST00000409416 TXKP42681 527 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 NTRK3Q16288 839 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 AMIGO3Q86WK7 504 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TEX11Q8IYF3 940 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 WDR24Q96S15 920 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TMEM51Q9NW97 253 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TUBE1Q9UJT0 475 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 FMNL1O95466 1100 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-204ENST00000409416 STAT6P42226 847 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TTC38Q5R3I4 469 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TRAPPC3LQ5T215 181 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 SOGA3Q5TF21 947 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 CRACR2BQ8N4Y2 399 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TIGD1Q96MW7 591 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TMX4Q9H1E5 349 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-204ENST00000409416 ZNF446Q9NWS9 450 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 HPSEQ9Y251 543 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TEX33O43247 280 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 TOB1P50616 345 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-204ENST00000409416 ZNF34Q8IZ26 560 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 CAPZA3Q96KX2 299 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 MMRN2Q9H8L6 949 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 DACH1Q9UI36 760 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 MORC2Q9Y6X9 1032 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-204ENST00000409416 RIC1Q4ADV7 1423 aa15.15■□□□□ 0.02
COL6A2-204ENST00000409416 ADAMTS3O15072 1205 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 PHACTR2O75167 634 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 SPECC1LQ69YQ0 1117 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 ARHGEF1Q92888 912 aaKnown RBP15.14■□□□□ 0.01
COL6A2-204ENST00000409416 CDK5RAP3Q96JB5 506 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 KANSL2Q9H9L4 492 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-204ENST00000409416 SOWAHDA6NJG2 315 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-204ENST00000409416 TAL1P17542 331 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-204ENST00000409416 MFSD14BQ5SR56 506 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 DHX37Q8IY37 1157 aaKnown RBP15.14■□□□□ 0.01
COL6A2-204ENST00000409416 GDAQ9Y2T3 454 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 ZNF804BA4D1E1 1349 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 TRIM49BA6NDI0 452 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 ARHGAP6O43182 974 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 KIF4BQ2VIQ3 1234 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 TBC1D10BQ4KMP7 808 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-204ENST00000409416 PARP10Q53GL7 1025 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 RILPL1Q5EBL4 403 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 PNMA1Q8ND90 353 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 PKD2L1Q9P0L9 805 aa15.14■□□□□ 0.01
COL6A2-204ENST00000409416 RHOXF2BP0C7M4 288 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 SPTY2D1Q68D10 685 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-204ENST00000409416 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 RHOXF2Q9BQY4 288 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 INTS13Q9NVM9 706 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 KIF20AO95235 890 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 TPM1P09493 284 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 IFNAR1P17181 557 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 TRIM28Q13263 835 aaKnown RBP15.13■□□□□ 0.01
COL6A2-204ENST00000409416 FBXL16Q8N461 479 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 COA7Q96BR5 231 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 TRIM47Q96LD4 638 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 CEP131Q9UPN4 1083 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 NTSR2O95665 410 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 TXLNAP40222 546 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 PPP2R3AQ06190 1150 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 IGSF22Q8N9C0 903 aa15.13■□□□□ 0.01
COL6A2-204ENST00000409416 BMP2KQ9NSY1 1161 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-204ENST00000409416 CCNT1O60563 726 aaKnown RBP15.12■□□□□ 0.01
COL6A2-204ENST00000409416 TSR1Q2NL82 804 aaKnown RBP15.12■□□□□ 0.01
COL6A2-204ENST00000409416 FILIP1LQ4L180 1135 aa15.12■□□□□ 0.01
COL6A2-204ENST00000409416 CTR9Q6PD62 1173 aa15.12■□□□□ 0.01
COL6A2-204ENST00000409416 FNBP4Q8N3X1 1017 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-204ENST00000409416 FBXO2Q9UK22 296 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-204ENST00000409416 GUCA1BQ9UMX6 200 aa15.12■□□□□ 0.01
COL6A2-204ENST00000409416 A0A0U1RQJ8 604 aa15.12■□□□□ 0.01
COL6A2-204ENST00000409416 RNASE9P60153 205 aaKnown RBP15.12■□□□□ 0.01
COL6A2-204ENST00000409416 GABPB1Q06547 395 aaPredicted RBP15.12■□□□□ 0.01
COL6A2-204ENST00000409416 TERF2Q15554 542 aa15.12■□□□□ 0.01
COL6A2-204ENST00000409416 ATRIPQ8WXE1 791 aa15.12■□□□□ 0.01
COL6A2-204ENST00000409416 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
COL6A2-204ENST00000409416 KRT18P05783 430 aaKnown RBP15.11■□□□□ 0.01
COL6A2-204ENST00000409416 PLCD1P51178 756 aa15.11■□□□□ 0.01
COL6A2-204ENST00000409416 ASIC1P78348 528 aa15.11■□□□□ 0.01
COL6A2-204ENST00000409416 REXO1L1PQ8IX06 675 aa15.11■□□□□ 0.01
COL6A2-204ENST00000409416 SRBD1Q8N5C6 995 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms