RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 GPR75-ASB3A0A0A6YYF3 556 aa20.44■□□□□ 0.86
CHTOP-205ENST00000403433 ACTN4O43707 911 aaKnown RBP20.44■□□□□ 0.86
CHTOP-205ENST00000403433 HMGB2P26583 209 aaKnown RBP20.44■□□□□ 0.86
CHTOP-205ENST00000403433 CALML3P27482 149 aa20.44■□□□□ 0.86
CHTOP-205ENST00000403433 GRM4Q14833 912 aa20.44■□□□□ 0.86
CHTOP-205ENST00000403433 MFSD14BQ5SR56 506 aa20.44■□□□□ 0.86
CHTOP-205ENST00000403433 TMC4Q7Z404 712 aa20.44■□□□□ 0.86
CHTOP-205ENST00000403433 FOXP4Q8IVH2 680 aaPredicted RBP20.44■□□□□ 0.86
CHTOP-205ENST00000403433 TEX11Q8IYF3 940 aa20.44■□□□□ 0.86
CHTOP-205ENST00000403433 SMARCE1Q969G3 411 aa20.44■□□□□ 0.86
CHTOP-205ENST00000403433 MAN1B1Q9UKM7 699 aa20.44■□□□□ 0.86
CHTOP-205ENST00000403433 C6orf229H3BNL8 230 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 MYO1BO43795 1136 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 TRAPPC10P48553 1259 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 PDILTQ8N807 584 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 SLC44A5Q8NCS7 719 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 MYRIPQ8NFW9 859 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 POLLQ9UGP5 575 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 DACH1Q9UI36 760 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 USP17L3A6NCW0 530 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 USP17L4A6NCW7 530 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 PPEF1O14829 653 aaPredicted RBP20.43■□□□□ 0.86
CHTOP-205ENST00000403433 PLCD1P51178 756 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 FANCCQ00597 558 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 ARID5BQ14865 1188 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 ZNF174Q15697 407 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 USP17L1Q7RTZ2 530 aa20.43■□□□□ 0.86
CHTOP-205ENST00000403433 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
CHTOP-205ENST00000403433 BAZ2BQ9UIF8 2168 aaKnown RBP20.42■□□□□ 0.86
CHTOP-205ENST00000403433 MYH1P12882 1939 aa20.42■□□□□ 0.86
CHTOP-205ENST00000403433 DYNC1I1O14576 645 aa20.42■□□□□ 0.86
CHTOP-205ENST00000403433 PRR29P0C7W0 189 aa20.42■□□□□ 0.86
CHTOP-205ENST00000403433 DHX8Q14562 1220 aaKnown RBP20.42■□□□□ 0.86
CHTOP-205ENST00000403433 NOM1Q5C9Z4 860 aaKnown RBP20.42■□□□□ 0.86
CHTOP-205ENST00000403433 NT5DC1Q5TFE4 455 aa20.42■□□□□ 0.86
CHTOP-205ENST00000403433 PIK3AP1Q6ZUJ8 805 aa20.42■□□□□ 0.86
CHTOP-205ENST00000403433 USP49Q70CQ1 688 aa20.42■□□□□ 0.86
CHTOP-205ENST00000403433 TRIML1Q8N9V2 468 aa20.42■□□□□ 0.86
CHTOP-205ENST00000403433 SH3GLB2Q9NR46 395 aa20.42■□□□□ 0.86
CHTOP-205ENST00000403433 FLT1P17948 1338 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 KLRG2A4D1S0 409 aaPredicted RBP20.41■□□□□ 0.86
CHTOP-205ENST00000403433 CBFA2T2O43439 604 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 SKILP12757 684 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 RASA1P20936 1047 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 TMC6Q7Z403 805 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 CCDC150Q8NCX0 1101 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 HSD3B7Q9H2F3 369 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 ANKRD31Q8N7Z5 1873 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 FOCADQ5VW36 1801 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 WNT7AO00755 349 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 ATP2C1P98194 919 aaPredicted RBP20.41■□□□□ 0.86
CHTOP-205ENST00000403433 TXNRD1Q16881 649 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 C16orf86Q6ZW13 317 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 MLKLQ8NB16 471 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 SYMPKQ92797 1274 aaKnown RBP20.41■□□□□ 0.86
CHTOP-205ENST00000403433 DHX58Q96C10 678 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 MAD2L2Q9UI95 211 aa20.41■□□□□ 0.86
CHTOP-205ENST00000403433 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 GAKO14976 1311 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 SERPINC1P01008 464 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 ATP1A3P13637 1013 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 SARSP49591 514 aaKnown RBP20.4■□□□□ 0.86
CHTOP-205ENST00000403433 GRAMD1CQ8IYS0 662 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 BLIDQ8IZY5 108 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 STAG2Q8N3U4 1231 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 FAM163AQ96GL9 167 aaPredicted RBP20.4■□□□□ 0.86
CHTOP-205ENST00000403433 EPSTI1Q96J88 318 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 STX8Q9UNK0 236 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 FAM205AQ6ZU69 1335 aa20.4■□□□□ 0.86
CHTOP-205ENST00000403433 BMP6P22004 513 aa20.39■□□□□ 0.86
CHTOP-205ENST00000403433 CCZ1BP86790 482 aa20.39■□□□□ 0.86
CHTOP-205ENST00000403433 CCZ1P86791 482 aaPredicted RBP20.39■□□□□ 0.86
CHTOP-205ENST00000403433 PTGDRQ13258 359 aa20.39■□□□□ 0.86
CHTOP-205ENST00000403433 MORC3Q14149 939 aa20.39■□□□□ 0.86
CHTOP-205ENST00000403433 SP8Q8IXZ3 490 aa20.39■□□□□ 0.86
CHTOP-205ENST00000403433 EYA3Q99504 573 aa20.39■□□□□ 0.86
CHTOP-205ENST00000403433 TMEM47Q9BQJ4 181 aa20.39■□□□□ 0.86
CHTOP-205ENST00000403433 SLFN14P0C7P3 912 aa20.39■□□□□ 0.85
CHTOP-205ENST00000403433 CDK8P49336 464 aa20.39■□□□□ 0.85
CHTOP-205ENST00000403433 TPD52L1Q16890 204 aaPredicted RBP20.39■□□□□ 0.85
CHTOP-205ENST00000403433 CCDC148Q8NFR7 591 aa20.39■□□□□ 0.85
CHTOP-205ENST00000403433 GPKOWQ92917 476 aaPredicted RBP eCLIP20.39■□□□□ 0.85
CHTOP-205ENST00000403433 C16orf45Q96MC5 204 aaPredicted RBP20.39■□□□□ 0.85
CHTOP-205ENST00000403433 LZTS2Q9BRK4 669 aa20.39■□□□□ 0.85
CHTOP-205ENST00000403433 PCDHA4Q9UN74 947 aa20.39■□□□□ 0.85
CHTOP-205ENST00000403433 VWA3AA6NCI4 1184 aa20.38■□□□□ 0.85
CHTOP-205ENST00000403433 VEGFAP15692 232 aaPredicted RBP20.38■□□□□ 0.85
CHTOP-205ENST00000403433 UBASH3AP57075 661 aa20.38■□□□□ 0.85
CHTOP-205ENST00000403433 RHBDL3P58872 404 aa20.38■□□□□ 0.85
CHTOP-205ENST00000403433 A0A087X0B3 334 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 MCM7P33993 719 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 FANCLQ9NW38 375 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 MTMR7Q9Y216 660 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 NRDCO43847 1150 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 SFPQP23246 707 aaKnown RBP eCLIP20.37■□□□□ 0.85
CHTOP-205ENST00000403433 CFAP100Q494V2 611 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 NEDD1Q8NHV4 660 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 SPATA20Q8TB22 786 aa20.37■□□□□ 0.85
CHTOP-205ENST00000403433 COA1Q9GZY4 146 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms