RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 NBPF10Q6P3W6 841 aaKnown RBP16.14■□□□□ 0.17
GABPA-202ENST00000400075 NBPF15Q8N660 670 aa16.14■□□□□ 0.17
GABPA-202ENST00000400075 NEMFO60524 1076 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 EPB41P11171 864 aaKnown RBP16.13■□□□□ 0.17
GABPA-202ENST00000400075 ZNF157P51786 506 aaPredicted RBP16.13■□□□□ 0.17
GABPA-202ENST00000400075 SEPT14Q6ZU15 432 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 RGS22Q8NE09 1264 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 CDHR1Q96JP9 859 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 TMEM106CQ9BVX2 250 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 TLR7Q9NYK1 1049 aaKnown RBP16.13■□□□□ 0.17
GABPA-202ENST00000400075 DDAH1O94760 285 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 GBP2P32456 591 aaPredicted RBP16.13■□□□□ 0.17
GABPA-202ENST00000400075 PPP1R2P41236 205 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 ZMYM1Q5SVZ6 1142 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 LMNB1P20700 586 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 ITPK1Q13572 414 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 LUZP1Q86V48 1076 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
GABPA-202ENST00000400075 STX10O60499 249 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 GOLGA1Q92805 767 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 TEKT3Q9BXF9 490 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 NT5C3AQ9H0P0 336 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 PODXL2Q9NZ53 605 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 PCDHA12Q9UN75 941 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 DCCP43146 1447 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 Q3C1V9 767 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 ALS2CR12Q96Q35 445 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 SPHKAPQ2M3C7 1700 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 ZRSR2Q15696 482 aaKnown RBP16.12■□□□□ 0.17
GABPA-202ENST00000400075 CMTR1Q8N1G2 835 aaKnown RBP16.12■□□□□ 0.17
GABPA-202ENST00000400075 SCG2P13521 617 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 STX17P56962 302 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 HUNKP57058 714 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
GABPA-202ENST00000400075 TEX35Q5T0J7 233 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 GRPEL1Q9HAV7 217 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 FBXO40Q9UH90 709 aa16.12■□□□□ 0.17
GABPA-202ENST00000400075 ABCA6Q8N139 1617 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 PRKAB2O43741 272 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 ARID5AQ03989 594 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 RAD51AP2Q09MP3 1159 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 TMC6Q7Z403 805 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 CCDC112Q8NEF3 446 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 CNTNAP4Q9C0A0 1308 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 USP17L10C9JJH3 530 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 CETN3O15182 167 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 KRT19P08727 400 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 SYT1P21579 422 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 AXDND1Q5T1B0 1012 aaPredicted RBP16.11■□□□□ 0.17
GABPA-202ENST00000400075 DYNLL2Q96FJ2 89 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 JPH2Q9BR39 696 aaPredicted RBP16.11■□□□□ 0.17
GABPA-202ENST00000400075 CENPHQ9H3R5 247 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 SLC16A2P36021 539 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 SMC1AQ14683 1233 aaKnown RBP16.11■□□□□ 0.17
GABPA-202ENST00000400075 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
GABPA-202ENST00000400075 TMED8Q6PL24 325 aaPredicted RBP16.11■□□□□ 0.17
GABPA-202ENST00000400075 IWS1Q96ST2 819 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 LRFN2Q9ULH4 789 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 CD163L1Q9NR16 1453 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 UNC13BO14795 1591 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 LMAN1P49257 510 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 STYK1Q6J9G0 422 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 CNNM4Q6P4Q7 775 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 TBC1D16Q8TBP0 767 aa16.11■□□□□ 0.17
GABPA-202ENST00000400075 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.1■□□□□ 0.17
GABPA-202ENST00000400075 ADD1P35611 737 aaKnown RBP16.1■□□□□ 0.17
GABPA-202ENST00000400075 CDK8P49336 464 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 FASTKD5Q7L8L6 764 aaKnown RBP16.1■□□□□ 0.17
GABPA-202ENST00000400075 TAX1BP1Q86VP1 789 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 TM6SF1Q9BZW5 370 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 CAMTA2O94983 1202 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 UBASH3AP57075 661 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 C9orf131Q5VYM1 1079 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 GALNT17Q6IS24 598 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 GIMAP6Q6P9H5 292 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 COL23A1Q86Y22 540 aaPredicted RBP16.1■□□□□ 0.17
GABPA-202ENST00000400075 EXOC3O60645 756 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 STRIP1Q5VSL9 837 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 RAET1EQ8TD07 263 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 SNX21Q969T3 373 aa16.1■□□□□ 0.17
GABPA-202ENST00000400075 NEK8Q86SG6 692 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 SLFN12Q8IYM2 578 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 GPKOWQ92917 476 aaPredicted RBP eCLIP16.09■□□□□ 0.17
GABPA-202ENST00000400075 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 RNF34Q969K3 372 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 NOX5Q96PH1 765 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 RTEL1Q9NZ71 1219 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
GABPA-202ENST00000400075 TNPO2O14787 897 aaKnown RBP16.09■□□□□ 0.17
GABPA-202ENST00000400075 POLGP54098 1239 aaPredicted RBP16.09■□□□□ 0.17
GABPA-202ENST00000400075 SSX2IPQ9Y2D8 614 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 MED23Q9ULK4 1368 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
GABPA-202ENST00000400075 FAM102BQ5T8I3 360 aa16.09■□□□□ 0.17
GABPA-202ENST00000400075 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms