RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 OTOP1Q7RTM1 612 aa20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 LPAR1Q92633 364 aa20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 RPAP3Q9H6T3 665 aaPredicted RBP20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 VCPKMTQ9H867 229 aa20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 NYAP2Q9P242 653 aa20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 TACC3Q9Y6A5 838 aa20.69■□□□□ 0.9
SMIM11A-202ENST00000399295 ORC4O43929 436 aa20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 RANBP6O60518 1105 aaKnown RBP20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 HERVK_113P62684 666 aa20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 CAP1Q01518 475 aa20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 CATSPERGQ6ZRH7 1159 aa20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 ANKRD13CQ8N6S4 541 aa20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 TOMM22Q9NS69 142 aa20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 CTNNA3Q9UI47 895 aa20.68■□□□□ 0.9
SMIM11A-202ENST00000399295 TSPY2A6NKD2 308 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 SGSM2O43147 1006 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 ECM2O94769 699 aaPredicted RBP20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 PRMT2P55345 433 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 KIAA1755Q5JYT7 1200 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 AKNAD1Q5T1N1 836 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 MFSD6Q6ZSS7 791 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 SPICE1Q8N0Z3 855 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 ARHGAP39Q9C0H5 1083 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 GOPCQ9HD26 462 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 MTMR4Q9NYA4 1195 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 CLIP2Q9UDT6 1046 aa20.67■□□□□ 0.9
SMIM11A-202ENST00000399295 PCP11498 1178 aaKnown RBP20.66■□□□□ 0.9
SMIM11A-202ENST00000399295 PSMC4P43686 418 aa20.66■□□□□ 0.9
SMIM11A-202ENST00000399295 IMMTQ16891 758 aaKnown RBP20.66■□□□□ 0.9
SMIM11A-202ENST00000399295 FAM110CQ1W6H9 321 aa20.66■□□□□ 0.9
SMIM11A-202ENST00000399295 RRP12Q5JTH9 1297 aaKnown RBP20.66■□□□□ 0.9
SMIM11A-202ENST00000399295 NBPF3Q9H094 633 aa20.66■□□□□ 0.9
SMIM11A-202ENST00000399295 RNF41Q9H4P4 317 aaPredicted RBP20.66■□□□□ 0.9
SMIM11A-202ENST00000399295 PLIN4Q96Q06 1357 aa20.66■□□□□ 0.9
SMIM11A-202ENST00000399295 RAD21O60216 631 aa20.65■□□□□ 0.9
SMIM11A-202ENST00000399295 FMNL1O95466 1100 aaPredicted RBP20.65■□□□□ 0.9
SMIM11A-202ENST00000399295 TTLL1O95922 423 aa20.65■□□□□ 0.9
SMIM11A-202ENST00000399295 TBC1D10CQ8IV04 446 aa20.65■□□□□ 0.9
SMIM11A-202ENST00000399295 GTF3C2Q8WUA4 911 aaPredicted RBP20.65■□□□□ 0.9
SMIM11A-202ENST00000399295 STAG1Q8WVM7 1258 aa20.65■□□□□ 0.9
SMIM11A-202ENST00000399295 MKL1Q969V6 931 aa20.65■□□□□ 0.9
SMIM11A-202ENST00000399295 TANGO6Q9C0B7 1094 aa20.65■□□□□ 0.9
SMIM11A-202ENST00000399295 HOXD10P28358 340 aa20.64■□□□□ 0.89
SMIM11A-202ENST00000399295 CTGFP29279 349 aa20.64■□□□□ 0.89
SMIM11A-202ENST00000399295 FCGRTP55899 365 aa20.64■□□□□ 0.89
SMIM11A-202ENST00000399295 PTH1RQ03431 593 aa20.64■□□□□ 0.89
SMIM11A-202ENST00000399295 PPP4R3BQ5MIZ7 849 aa20.64■□□□□ 0.89
SMIM11A-202ENST00000399295 TRIM47Q96LD4 638 aa20.64■□□□□ 0.89
SMIM11A-202ENST00000399295 RBPJLQ9UBG7 517 aa20.64■□□□□ 0.89
SMIM11A-202ENST00000399295 MORF4L1Q9UBU8 362 aa20.64■□□□□ 0.89
SMIM11A-202ENST00000399295 GREB1LQ9C091 1923 aaPredicted RBP20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 F5H6K3 240 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 WDR46O15213 610 aaKnown RBP20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 KLRC3Q07444 240 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 COG2Q14746 738 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 KIAA1211Q6ZU35 1233 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 GPRC5AQ8NFJ5 357 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 IL17RBQ9NRM6 502 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 HOXC10Q9NYD6 342 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 SYNPO2Q9UMS6 1093 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 PTPN22Q9Y2R2 807 aa20.63■□□□□ 0.89
SMIM11A-202ENST00000399295 NMT2O60551 498 aa20.62■□□□□ 0.89
SMIM11A-202ENST00000399295 ESYT1Q9BSJ8 1104 aa20.62■□□□□ 0.89
SMIM11A-202ENST00000399295 PAGR1Q9BTK6 254 aa20.62■□□□□ 0.89
SMIM11A-202ENST00000399295 TXNRD2Q9NNW7 524 aa20.62■□□□□ 0.89
SMIM11A-202ENST00000399295 STX8Q9UNK0 236 aa20.62■□□□□ 0.89
SMIM11A-202ENST00000399295 U3KPZ7 1027 aaPredicted RBP20.62■□□□□ 0.89
SMIM11A-202ENST00000399295 NEDD4P46934 1319 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 SPDYE16A6NNV3 312 aaPredicted RBP20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 PEX10O60683 326 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 FLOT1O75955 427 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 SEC24BO95487 1268 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 NDUFB10O96000 172 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 POTEEQ6S8J3 1075 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 LBX2Q6XYB7 198 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 LRRC47Q8N1G4 583 aaKnown RBP20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 ESR2Q92731 530 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 HPS5Q9UPZ3 1129 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 RABGAP1Q9Y3P9 1069 aa20.61■□□□□ 0.89
SMIM11A-202ENST00000399295 TNPO2O14787 897 aaKnown RBP20.6■□□□□ 0.89
SMIM11A-202ENST00000399295 NT5C2P49902 561 aa20.6■□□□□ 0.89
SMIM11A-202ENST00000399295 FAM83BQ5T0W9 1011 aa20.6■□□□□ 0.89
SMIM11A-202ENST00000399295 MAP4K1Q92918 833 aa20.6■□□□□ 0.89
SMIM11A-202ENST00000399295 TCP11L1Q9NUJ3 509 aa20.6■□□□□ 0.89
SMIM11A-202ENST00000399295 SRRDQ9UH36 339 aa20.6■□□□□ 0.89
SMIM11A-202ENST00000399295 REC8O95072 547 aa20.59■□□□□ 0.89
SMIM11A-202ENST00000399295 DSG3P32926 999 aa20.59■□□□□ 0.89
SMIM11A-202ENST00000399295 ERVK-9P63128 1117 aa20.59■□□□□ 0.89
SMIM11A-202ENST00000399295 ERVK-24P63145 666 aa20.59■□□□□ 0.89
SMIM11A-202ENST00000399295 Q3C1V9 767 aa20.59■□□□□ 0.89
SMIM11A-202ENST00000399295 GMCL1P1Q8NEA9 526 aa20.59■□□□□ 0.89
SMIM11A-202ENST00000399295 NKX2-3Q8TAU0 364 aa20.59■□□□□ 0.89
SMIM11A-202ENST00000399295 NUP88Q99567 741 aaPredicted RBP20.59■□□□□ 0.89
SMIM11A-202ENST00000399295 CCDC85CA6NKD9 419 aa20.58■□□□□ 0.89
SMIM11A-202ENST00000399295 CNMDO75829 334 aa20.58■□□□□ 0.89
SMIM11A-202ENST00000399295 NOVP48745 357 aa20.58■□□□□ 0.89
SMIM11A-202ENST00000399295 SLFN13Q68D06 897 aa20.58■□□□□ 0.89
SMIM11A-202ENST00000399295 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.89
SMIM11A-202ENST00000399295 NBPF11Q86T75 865 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms