RNA–Protein interactions for RNA: ENST00000398646.3

FAM3B-202, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 5 BASIC

Gene FAM3B, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-202ENST00000398646 GUCY1A2P33402 732 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 NOVP48745 357 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 ATP2B2Q01814 1243 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 GNL2Q13823 731 aaKnown RBP11.34□□□□□ -0.59
FAM3B-202ENST00000398646 KIF4BQ2VIQ3 1234 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 TBC1D10BQ4KMP7 808 aaPredicted RBP11.34□□□□□ -0.59
FAM3B-202ENST00000398646 KRT40Q6A162 431 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 FAM173BQ6P4H8 233 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 USP48Q86UV5 1035 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 METTL16Q86W50 562 aaKnown RBP11.34□□□□□ -0.59
FAM3B-202ENST00000398646 SRBD1Q8N5C6 995 aaKnown RBP11.34□□□□□ -0.59
FAM3B-202ENST00000398646 AIFM3Q96NN9 605 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 CABP5Q9NP86 173 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
FAM3B-202ENST00000398646 V9GY48 417 aaPredicted RBP11.34□□□□□ -0.59
FAM3B-202ENST00000398646 CNTNAP5Q8WYK1 1306 aa11.34□□□□□ -0.59
FAM3B-202ENST00000398646 SIPA1L1O43166 1804 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 FIBPO43427 364 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 GDF11O95390 407 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 PARP1P09874 1014 aaKnown RBP11.33□□□□□ -0.6
FAM3B-202ENST00000398646 FUT2Q10981 343 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 TNFAIP1Q13829 316 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 SAFBQ15424 915 aaKnown RBP eCLIP11.33□□□□□ -0.6
FAM3B-202ENST00000398646 ABCB5Q2M3G0 1257 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 TMEM179Q6ZVK1 233 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 GPC2Q8N158 579 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 TMEM87AQ8NBN3 555 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
FAM3B-202ENST00000398646 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 GJB4Q9NTQ9 266 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 RNF181Q9P0P0 153 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 RBM27Q9P2N5 1060 aaKnown RBP11.33□□□□□ -0.6
FAM3B-202ENST00000398646 MAD2L2Q9UI95 211 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
FAM3B-202ENST00000398646 PALM3A6NDB9 673 aaPredicted RBP11.32□□□□□ -0.6
FAM3B-202ENST00000398646 UBE2Q2LH0YL09 131 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 TBC1D12O60347 775 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 YBX3P16989 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
FAM3B-202ENST00000398646 KIF23Q02241 960 aaPredicted RBP11.32□□□□□ -0.6
FAM3B-202ENST00000398646 PKN1Q16512 942 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 BRAPQ7Z569 592 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 LRRC47Q8N1G4 583 aaKnown RBP11.32□□□□□ -0.6
FAM3B-202ENST00000398646 STAG2Q8N3U4 1231 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 TMEM39BQ9GZU3 492 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 SCAND2PQ9GZW5 306 aaPredicted RBP11.32□□□□□ -0.6
FAM3B-202ENST00000398646 KANSL2Q9H9L4 492 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 NYAP2Q9P242 653 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 TFIP11Q9UBB9 837 aaKnown RBP11.32□□□□□ -0.6
FAM3B-202ENST00000398646 CFAP45Q9UL16 551 aa11.32□□□□□ -0.6
FAM3B-202ENST00000398646 DICER1Q9UPY3 1922 aaKnown RBP11.32□□□□□ -0.6
FAM3B-202ENST00000398646 hCG_1642624A0A1W2PR95 340 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 USP17L5A8MUK1 530 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 KLRF2D3W0D1 207 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 EGFRP00533 1210 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 GOLGA8HP0CJ92 632 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 ICA1Q05084 483 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 RASA3Q14644 834 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 SEPT2Q15019 361 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 KLHL40Q2TBA0 621 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 ATL3Q6DD88 541 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 USP17L2Q6R6M4 530 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 GPRC5DQ9NZD1 345 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 HACL1Q9UJ83 578 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 KCNJ14Q9UNX9 436 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 MYH6P13533 1939 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 TCHHQ07283 1943 aa11.31□□□□□ -0.6
FAM3B-202ENST00000398646 KIF28PB7ZC32 967 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 GADD45BO75293 160 aaPredicted RBP11.3□□□□□ -0.6
FAM3B-202ENST00000398646 MBD3O95983 291 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 GH2P01242 217 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 MMP1P03956 469 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 PDHBP11177 359 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 SCG2P13521 617 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
FAM3B-202ENST00000398646 LMOD1P29536 600 aaPredicted RBP11.3□□□□□ -0.6
FAM3B-202ENST00000398646 PFKFB3Q16875 520 aaPredicted RBP11.3□□□□□ -0.6
FAM3B-202ENST00000398646 ASPRV1Q53RT3 343 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 MKL1Q969V6 931 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 BRMS1Q9HCU9 246 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 VPS54Q9P1Q0 977 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 PGAP2Q9UHJ9 254 aa11.3□□□□□ -0.6
FAM3B-202ENST00000398646 GREB1LQ9C091 1923 aaPredicted RBP11.3□□□□□ -0.6
FAM3B-202ENST00000398646 FRMPD2Q68DX3 1309 aaPredicted RBP11.3□□□□□ -0.6
FAM3B-202ENST00000398646 SBF1O95248 1867 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 RAD21O60216 631 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 DDNO94850 711 aaPredicted RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 EPS15P42566 896 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 UBE2HP62256 183 aa11.29□□□□□ -0.6
FAM3B-202ENST00000398646 CEBPZQ03701 1054 aaKnown RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
FAM3B-202ENST00000398646 GPR162Q16538 588 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms