RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 FAM163AQ96GL9 167 aaPredicted RBP19.2■□□□□ 0.66
NUP50-202ENST00000396096 RRP9O43818 475 aaKnown RBP19.19■□□□□ 0.66
NUP50-202ENST00000396096 SKILP12757 684 aa19.19■□□□□ 0.66
NUP50-202ENST00000396096 LMOD1P29536 600 aaPredicted RBP19.19■□□□□ 0.66
NUP50-202ENST00000396096 GNAQP50148 359 aa19.19■□□□□ 0.66
NUP50-202ENST00000396096 ATP2C1P98194 919 aaPredicted RBP19.19■□□□□ 0.66
NUP50-202ENST00000396096 MLKLQ8NB16 471 aa19.19■□□□□ 0.66
NUP50-202ENST00000396096 PNMA1Q8ND90 353 aa19.19■□□□□ 0.66
NUP50-202ENST00000396096 DYNLL2Q96FJ2 89 aa19.19■□□□□ 0.66
NUP50-202ENST00000396096 GPR101Q96P66 508 aaPredicted RBP19.19■□□□□ 0.66
NUP50-202ENST00000396096 FOCADQ5VW36 1801 aa19.19■□□□□ 0.66
NUP50-202ENST00000396096 CBFA2T2O43439 604 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 CALML3P27482 149 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 USP49Q70CQ1 688 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 TMC4Q7Z404 712 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 TGFBRAP1Q8WUH2 860 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 SMARCE1Q969G3 411 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 CCDC34Q96HJ3 373 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 MKNK2Q9HBH9 465 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 DACH1Q9UI36 760 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 PRR29P0C7W0 189 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 PLCG2P16885 1265 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 NLRP5P59047 1200 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 CT47A1Q5JQC4 288 aaPredicted RBP19.18■□□□□ 0.66
NUP50-202ENST00000396096 SH3RF1Q7Z6J0 888 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 FAM177A1Q8N128 213 aaPredicted RBP19.18■□□□□ 0.66
NUP50-202ENST00000396096 ZNF287Q9HBT7 754 aa19.18■□□□□ 0.66
NUP50-202ENST00000396096 BRWD3Q6RI45 1802 aa19.17■□□□□ 0.66
NUP50-202ENST00000396096 POLRMTO00411 1230 aaKnown RBP19.17■□□□□ 0.66
NUP50-202ENST00000396096 WNT7AO00755 349 aa19.17■□□□□ 0.66
NUP50-202ENST00000396096 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
NUP50-202ENST00000396096 BTDP43251 543 aa19.17■□□□□ 0.66
NUP50-202ENST00000396096 DDR1Q08345 913 aa19.17■□□□□ 0.66
NUP50-202ENST00000396096 TMC6Q7Z403 805 aa19.17■□□□□ 0.66
NUP50-202ENST00000396096 TBC1D22AQ8WUA7 517 aa19.17■□□□□ 0.66
NUP50-202ENST00000396096 GAKO14976 1311 aa19.17■□□□□ 0.66
NUP50-202ENST00000396096 SLFN14P0C7P3 912 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 TSPY3P0CV98 308 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 TSPY8P0CW00 308 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 ATP1A3P13637 1013 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 RASA1P20936 1047 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 KCNJ6P48051 423 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 NOM1Q5C9Z4 860 aaKnown RBP19.16■□□□□ 0.66
NUP50-202ENST00000396096 SLF2Q8IX21 1173 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 ZNF444Q8N0Y2 327 aaPredicted RBP19.16■□□□□ 0.66
NUP50-202ENST00000396096 TBC1D16Q8TBP0 767 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 MAD2L2Q9UI95 211 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 BAZ2BQ9UIF8 2168 aaKnown RBP19.16■□□□□ 0.66
NUP50-202ENST00000396096 MYH1P12882 1939 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 FAM205AQ6ZU69 1335 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 HSPA1LP34931 641 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 PLCD1P51178 756 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 ZNF174Q15697 407 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 C16orf86Q6ZW13 317 aa19.16■□□□□ 0.66
NUP50-202ENST00000396096 ENOX1Q8TC92 643 aaKnown RBP19.16■□□□□ 0.66
NUP50-202ENST00000396096 SNED1Q8TER0 1413 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 ANKRD31Q8N7Z5 1873 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 NRXN2Q9P2S2 1712 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 A0A087X0B3 334 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 PTGDRQ13258 359 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 ARMCX5Q6P1M9 558 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 MAPKAPK5Q8IW41 473 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 PDILTQ8N807 584 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 DAGLBQ8NCG7 672 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 SYMPKQ92797 1274 aaKnown RBP19.15■□□□□ 0.66
NUP50-202ENST00000396096 EPSTI1Q96J88 318 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 LZTS2Q9BRK4 669 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 FANCLQ9NW38 375 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 POLLQ9UGP5 575 aa19.15■□□□□ 0.66
NUP50-202ENST00000396096 USP17L3A6NCW0 530 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 USP17L4A6NCW7 530 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 VEGFAP15692 232 aaPredicted RBP19.14■□□□□ 0.65
NUP50-202ENST00000396096 UBASH3AP57075 661 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 RHBDL3P58872 404 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 TPD52L1Q16890 204 aaPredicted RBP19.14■□□□□ 0.65
NUP50-202ENST00000396096 SLC4A8Q2Y0W8 1093 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 USP17L1Q7RTZ2 530 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 BLIDQ8IZY5 108 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 STAG2Q8N3U4 1231 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 PYM1Q9BRP8 204 aaKnown RBP19.14■□□□□ 0.65
NUP50-202ENST00000396096 PCDHA4Q9UN74 947 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 QSER1Q2KHR3 1735 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 PALM3A6NDB9 673 aaPredicted RBP19.14■□□□□ 0.65
NUP50-202ENST00000396096 M0R2N6 131 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 TNNT1P13805 278 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 ZNF18P17022 549 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 ERCC5P28715 1186 aaPredicted RBP19.14■□□□□ 0.65
NUP50-202ENST00000396096 ARL6IP4Q66PJ3 421 aaKnown RBP19.14■□□□□ 0.65
NUP50-202ENST00000396096 GALNT17Q6IS24 598 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 PIK3AP1Q6ZUJ8 805 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 NYAP1Q6ZVC0 841 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 SP8Q8IXZ3 490 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 TEX11Q8IYF3 940 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 GRAMD1CQ8IYS0 662 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 DHX58Q96C10 678 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 C16orf45Q96MC5 204 aaPredicted RBP19.14■□□□□ 0.65
NUP50-202ENST00000396096 TMEM47Q9BQJ4 181 aa19.14■□□□□ 0.65
NUP50-202ENST00000396096 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
NUP50-202ENST00000396096 SERPINC1P01008 464 aa19.13■□□□□ 0.65
NUP50-202ENST00000396096 SFPQP23246 707 aaKnown RBP eCLIP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms