RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 VPS54Q9P1Q0 977 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 EPN1Q9Y6I3 576 aaPredicted RBP18.53■□□□□ 0.56
CNP-201ENST00000393888 PES1O00541 588 aaKnown RBP18.53■□□□□ 0.56
CNP-201ENST00000393888 ZNF185O15231 689 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 PRKAB2O43741 272 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 LIFRP42702 1097 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 COPB1P53618 953 aaKnown RBP18.53■□□□□ 0.56
CNP-201ENST00000393888 IFIT5Q13325 482 aaKnown RBP18.53■□□□□ 0.56
CNP-201ENST00000393888 DNAJC21Q5F1R6 531 aaKnown RBP18.53■□□□□ 0.56
CNP-201ENST00000393888 IFNL3Q8IZI9 196 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 CRACR2BQ8N4Y2 399 aaPredicted RBP18.53■□□□□ 0.56
CNP-201ENST00000393888 STRBPQ96SI9 672 aaKnown RBP18.53■□□□□ 0.56
CNP-201ENST00000393888 NAPBQ9H115 298 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 CEP131Q9UPN4 1083 aa18.53■□□□□ 0.56
CNP-201ENST00000393888 CDHR2Q9BYE9 1310 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 ZC3H4Q9UPT8 1303 aaKnown RBP18.52■□□□□ 0.56
CNP-201ENST00000393888 NDUFA10O95299 355 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 MRPS25P82663 173 aaKnown RBP18.52■□□□□ 0.56
CNP-201ENST00000393888 ZNF174Q15697 407 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 TTC19Q6DKK2 380 aaPredicted RBP18.52■□□□□ 0.56
CNP-201ENST00000393888 BRINP3Q76B58 766 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 ARMT1Q9H993 441 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 DCCP43146 1447 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 FECHP22830 423 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 CCT5P48643 541 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 AARSP49588 968 aaKnown RBP eCLIP18.52■□□□□ 0.56
CNP-201ENST00000393888 LIG3P49916 1009 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 UBXN1Q04323 297 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 LDHAL6AQ6ZMR3 332 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 SH3RF1Q7Z6J0 888 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 KAT14Q9H8E8 782 aa18.52■□□□□ 0.56
CNP-201ENST00000393888 TRIM75PA6NK02 468 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 DEXIO95424 95 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 PHKA1P46020 1223 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 WTAPQ15007 396 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 COG1Q8WTW3 980 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 AATFQ9NY61 560 aaKnown RBP eCLIP18.51■□□□□ 0.55
CNP-201ENST00000393888 MYO1AQ9UBC5 1043 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 ITIH6Q6UXX5 1313 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 AGPSO00116 658 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 GUCY2CP25092 1073 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 CCDC122Q5T0U0 273 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 CTCFLQ8NI51 663 aaPredicted RBP18.51■□□□□ 0.55
CNP-201ENST00000393888 SAR1BQ9Y6B6 198 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 AKAP11Q9UKA4 1901 aa18.51■□□□□ 0.55
CNP-201ENST00000393888 LOC102724159A0A0B4J2E5 919 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 KCNJ18B7U540 433 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 MBD4O95243 580 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 KCNJ12Q14500 433 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 PWP2Q15269 919 aaKnown RBP18.5■□□□□ 0.55
CNP-201ENST00000393888 TADA2BQ86TJ2 420 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 GSDMAQ96QA5 445 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 CRACR2AQ9BSW2 395 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 VIPAS39Q9H9C1 493 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 TTC26A0AVF1 554 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 HERVK_113P62684 666 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 MFSD6Q6ZSS7 791 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 EFCAB13Q8IY85 973 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 HELBQ8NG08 1087 aaPredicted RBP18.5■□□□□ 0.55
CNP-201ENST00000393888 SELENOOQ9BVL4 669 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 CNNM1Q9NRU3 951 aa18.5■□□□□ 0.55
CNP-201ENST00000393888 GNL3LQ9NVN8 582 aaKnown RBP18.5■□□□□ 0.55
CNP-201ENST00000393888 LIMA1Q9UHB6 759 aaKnown RBP18.5■□□□□ 0.55
CNP-201ENST00000393888 KIF1AQ12756 1690 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 EXOC5O00471 708 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 TUBBP07437 444 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 C2orf54Q08AI8 447 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 UBE3CQ15386 1083 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 TCP11X2Q5H9J9 407 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 CAGE1Q8TC20 777 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 XDHP47989 1333 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 TCRBV5S4A2TA0A5A2 114 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 PDE2AO00408 941 aaPredicted RBP18.49■□□□□ 0.55
CNP-201ENST00000393888 SEMA3EO15041 775 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 TCIRG1Q13488 830 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 TTF1Q15361 905 aaPredicted RBP18.49■□□□□ 0.55
CNP-201ENST00000393888 AKNAD1Q5T1N1 836 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 MAGEB6Q8N7X4 407 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 NELFBQ8WX92 580 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 TBC1D2BQ9UPU7 963 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 GDAQ9Y2T3 454 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 DUSP10Q9Y6W6 482 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
CNP-201ENST00000393888 TRIM49BA6NDI0 452 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 PATL2C9JE40 543 aaKnown RBP18.48■□□□□ 0.55
CNP-201ENST00000393888 SMIM22K7EJ46 135 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 FKBP15Q5T1M5 1219 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 GPATCH11Q8N954 259 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 FANCBQ8NB91 859 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 KAT2BQ92831 832 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 JAKMIP2Q96AA8 810 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 EEF2KMTQ96G04 330 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 GREM2Q9H772 168 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 RIPOR2Q9Y4F9 1068 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 SNAP23O00161 211 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 MAP9Q49MG5 647 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 DEF6Q9H4E7 631 aa18.48■□□□□ 0.55
CNP-201ENST00000393888 RIC1Q4ADV7 1423 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms