RNA–Protein interactions for RNA: ENST00000384619.1

RNVU1-17-201, Transcript of RNA, variant U1 small nuclear 17, humanhuman

BASIC

Gene RNVU1-17, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-17-201ENST00000384619 GTF2A2P52657 109 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 INHBEP58166 350 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 SNAPC2Q13487 334 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 TOB2Q14106 344 aaPredicted RBP11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 GPATCH4Q5T3I0 446 aaKnown RBP11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 ZNF654Q8IZM8 581 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 NKX2-3Q8TAU0 364 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 OTUD5Q96G74 571 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 GMCL1Q96IK5 515 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 LZTS2Q9BRK4 669 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 VCPKMTQ9H867 229 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 SH2B1Q9NRF2 756 aaPredicted RBP11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 NAP1L2Q9ULW6 460 aaPredicted RBP11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 KCNH4Q9UQ05 1017 aa11.61□□□□□ -0.55
RNVU1-17-201ENST00000384619 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 TRIM75PA6NK02 468 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 IRF6O14896 467 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 CETPP11597 493 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 PDIA3P30101 505 aaKnown RBP11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 ECE1P42892 770 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 SLC1A4P43007 532 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 APOBRQ0VD83 1088 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 TROAPQ12815 778 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 BECN1Q14457 450 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 SHROOM1Q2M3G4 852 aaPredicted RBP11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 DEFB115Q30KQ5 88 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 SPRYD7Q5W111 196 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 SLFN13Q68D06 897 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 CPLX2Q6PUV4 134 aaKnown RBP11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 APOA5Q6Q788 366 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 FANCBQ8NB91 859 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 ACER1Q8TDN7 264 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 DCAF4Q8WV16 495 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 C12orf42Q96LP6 360 aa11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 GPHNQ9NQX3 736 aaPredicted RBP11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 RBM28Q9NW13 759 aaKnown RBP11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.6□□□□□ -0.55
RNVU1-17-201ENST00000384619 RAD21O60216 631 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 PARP1P09874 1014 aaKnown RBP11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 SMARCA1P28370 1054 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 ANP32AP39687 249 aaKnown RBP11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 PABPC4Q13310 644 aaKnown RBP eCLIP11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 MTMR2Q13614 643 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 ASPRV1Q53RT3 343 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 CLEC10AQ8IUN9 316 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 HSCBQ8IWL3 235 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 LRRC47Q8N1G4 583 aaKnown RBP11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 CHURC1Q8WUH1 139 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 NUP133Q8WUM0 1156 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 BRPF3Q9ULD4 1205 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 TPCN1Q9ULQ1 816 aa11.59□□□□□ -0.55
RNVU1-17-201ENST00000384619 DDX60LQ5H9U9 1706 aaKnown RBP11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 A0A0G2JLL6 359 aaPredicted RBP11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 MANSC4A6NHS7 340 aaPredicted RBP11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 RASSF10A6NK89 507 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 GOLGA8BA8MQT2 603 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 CPLX1O14810 134 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 WDR46O15213 610 aaKnown RBP11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 PLA2G6O60733 806 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 PFKFB2O60825 505 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 NDUFB10O96000 172 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 SNHG28P0DPA3 235 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 PDHBP11177 359 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 BMP3P12645 472 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 METAP2P50579 478 aaKnown RBP eCLIP11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 PRRT2Q7Z6L0 340 aaPredicted RBP11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 SENP2Q9HC62 589 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 HOXC10Q9NYD6 342 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 UTRNP46939 3433 aa11.58□□□□□ -0.56
RNVU1-17-201ENST00000384619 NAV1Q8NEY1 1877 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 GOLGA8AA7E2F4 631 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L15C9J2P7 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L13C9JLJ4 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L11C9JVI0 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 KLRF2D3W0D1 207 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L18D6R9N7 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L22D6RA61 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L17D6RBQ6 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L19D6RCP7 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L20D6RJB6 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 K7ELQ4 463 aaPredicted RBP11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 CDKL5O76039 1030 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 SLC10A3P09131 477 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 FDX1P10109 184 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 HMGCS2P54868 508 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 USP17L24Q0WX57 530 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 NOGQ13253 232 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 GRM4Q14833 912 aa11.57□□□□□ -0.56
RNVU1-17-201ENST00000384619 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms