RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 BIN1O00499 593 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 CUTAO60888 179 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 TOMM70O94826 608 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 CALM1P0DP23 149 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 CALM2P0DP24 149 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 CALM3P0DP25 149 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 HIRAP54198 1017 aaPredicted RBP13.89□□□□□ -0.19
HMGCL-202ENST00000374487 GTF2IP78347 998 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 FMR1Q06787 632 aaKnown RBP eCLIP13.89□□□□□ -0.19
HMGCL-202ENST00000374487 RILPL1Q5EBL4 403 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 SHC4Q6S5L8 630 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 SARM1Q6SZW1 724 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 DLK2Q6UY11 383 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 SAMD7Q7Z3H4 446 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 C17orf53Q8N3J3 647 aaPredicted RBP13.89□□□□□ -0.19
HMGCL-202ENST00000374487 TRPM4Q8TD43 1214 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 TIGD1Q96MW7 591 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 GPRC5DQ9NZD1 345 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 FGRP09769 529 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 HTRA3P83110 453 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 MICALL2Q8IY33 904 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 KRI1Q8N9T8 703 aaKnown RBP13.89□□□□□ -0.19
HMGCL-202ENST00000374487 CLIC6Q96NY7 704 aa13.89□□□□□ -0.19
HMGCL-202ENST00000374487 RBM28Q9NW13 759 aaKnown RBP13.89□□□□□ -0.19
HMGCL-202ENST00000374487 ARPP21Q9UBL0 812 aaPredicted RBP13.89□□□□□ -0.19
HMGCL-202ENST00000374487 CNOT7Q9UIV1 285 aaKnown RBP13.89□□□□□ -0.19
HMGCL-202ENST00000374487 LDHBP07195 334 aaKnown RBP13.88□□□□□ -0.19
HMGCL-202ENST00000374487 VIL1P09327 827 aaKnown RBP13.88□□□□□ -0.19
HMGCL-202ENST00000374487 CDC25BP30305 580 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 PDE4BQ07343 736 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 TNIP1Q15025 636 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 RESP18Q5W5W9 173 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 WDR66Q8TBY9 1149 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 KIAA1524Q8TCG1 905 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 COA1Q9GZY4 146 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 NRBP1Q9UHY1 535 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 SCAF8Q9UPN6 1271 aaKnown RBP13.88□□□□□ -0.19
HMGCL-202ENST00000374487 HPSEQ9Y251 543 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 ASTN2O75129 1339 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-202ENST00000374487 USP17L3A6NCW0 530 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 USP17L4A6NCW7 530 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 NLRP12P59046 1061 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 NR5A1Q13285 461 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 TBC1D10BQ4KMP7 808 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-202ENST00000374487 DACT2Q5SW24 774 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 MAP1SQ66K74 1059 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-202ENST00000374487 USP17L1Q7RTZ2 530 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 CERS5Q8N5B7 392 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 MRFAP1L1Q96HT8 127 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 PYCARDQ9ULZ3 195 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
HMGCL-202ENST00000374487 V9GY48 417 aaPredicted RBP13.88□□□□□ -0.19
HMGCL-202ENST00000374487 ORC4O43929 436 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 ATP2B1P20020 1258 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 TOB1P50616 345 aaPredicted RBP13.87□□□□□ -0.19
HMGCL-202ENST00000374487 TPM4P67936 248 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 GRIK5Q16478 980 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 ZNF804AQ7Z570 1209 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 SPTLC3Q9NUV7 552 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 KCNH3Q9ULD8 1083 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 CEP131Q9UPN4 1083 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 CEP350Q5VT06 3117 aa13.87□□□□□ -0.19
HMGCL-202ENST00000374487 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 TSPY2A6NKD2 308 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 DDAH1O94760 285 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 USP5P45974 858 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 TROAPQ12815 778 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 SBK1Q52WX2 424 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 RSBN1LQ6PCB5 846 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 C15orf52Q6ZUT6 534 aaKnown RBP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 CNNM3Q8NE01 707 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 CTCFLQ8NI51 663 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 BPIFA3Q9BQP9 254 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 CABP5Q9NP86 173 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 FAM13BQ9NYF5 915 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 VPS54Q9P1Q0 977 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 PCDHAC2Q9Y5I4 1007 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 FAM237AA0A1B0GTK4 181 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 F8W031 263 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 CYP2D6P10635 497 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 GSTO1P78417 241 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 ISM2Q6H9L7 571 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 OXER1Q8TDS5 423 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 GMLQ99445 158 aa13.86□□□□□ -0.19
HMGCL-202ENST00000374487 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 HOOK1Q9UJC3 728 aaKnown RBP13.86□□□□□ -0.19
HMGCL-202ENST00000374487 SMTNL1A8MU46 457 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 NMT2O60551 498 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 BAG3O95817 575 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 EVX2Q03828 476 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 SLC4A8Q2Y0W8 1093 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms