RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 USH1GQ495M9 461 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 DYMQ7RTS9 669 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 KRT27Q7Z3Y8 459 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 GRAPLQ8TC17 118 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-203ENST00000374429 USP40Q9NVE5 1235 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 CTNND2Q9UQB3 1225 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 CLRN2A0PK11 232 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 URI1O94763 535 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-203ENST00000374429 FMR1Q06787 632 aaKnown RBP eCLIP12.29□□□□□ -0.44
CXCL12-203ENST00000374429 RILPL1Q5EBL4 403 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 SLC30A10Q6XR72 485 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 FBXO33Q7Z6M2 555 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 CENPFP49454 3210 aa12.29□□□□□ -0.44
CXCL12-203ENST00000374429 GYS1P13807 737 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 TECP42680 631 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 NLRP12P59046 1061 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 TXNRD1Q16881 649 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 CEP135Q66GS9 1140 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 TDRD7Q8NHU6 1098 aaKnown RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 PIGSQ96S52 555 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 SEC63Q9UGP8 760 aaKnown RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 HOOK1Q9UJC3 728 aaKnown RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 ECM2O94769 699 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 SCG2P13521 617 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 SPTY2D1Q68D10 685 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 CCDC84Q86UT8 332 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 NUP88Q99567 741 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 PDGFDQ9GZP0 370 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 COL18A1P39060 1754 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 A0A087X0B3 334 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 USP17L5A8MUK1 530 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 MYL5Q02045 173 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 TROAPQ12815 778 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 UBE2SQ16763 222 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 SGMS1Q86VZ5 419 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-203ENST00000374429 CEP95Q96GE4 821 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
CXCL12-203ENST00000374429 STAT6P42226 847 aa12.27□□□□□ -0.44
CXCL12-203ENST00000374429 TTBK2Q6IQ55 1244 aa12.27□□□□□ -0.44
CXCL12-203ENST00000374429 BARGINQ6ZT62 677 aa12.27□□□□□ -0.44
CXCL12-203ENST00000374429 WDR66Q8TBY9 1149 aa12.27□□□□□ -0.44
CXCL12-203ENST00000374429 SHISA4Q96DD7 197 aa12.27□□□□□ -0.44
CXCL12-203ENST00000374429 TMEM47Q9BQJ4 181 aa12.27□□□□□ -0.44
CXCL12-203ENST00000374429 EPC1Q9H2F5 836 aa12.27□□□□□ -0.44
CXCL12-203ENST00000374429 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.44
CXCL12-203ENST00000374429 SMTNL1A8MU46 457 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 KIF5BP33176 963 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 PTPAQ15257 358 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 TYW1BQ6NUM6 668 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 GDAQ9Y2T3 454 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 XDHP47989 1333 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 CUTAO60888 179 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 CDK8P49336 464 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 UBXN2AP68543 259 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 DDR1Q08345 913 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 HS1BP3Q53T59 392 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 RBM17Q96I25 401 aaKnown RBP12.27□□□□□ -0.45
CXCL12-203ENST00000374429 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 TAB2Q9NYJ8 693 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-203ENST00000374429 MAN1B1Q9UKM7 699 aa12.27□□□□□ -0.45
CXCL12-203ENST00000374429 TRIM49BA6NDI0 452 aa12.26□□□□□ -0.45
CXCL12-203ENST00000374429 TNNT3P45378 269 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-203ENST00000374429 NFIAQ12857 509 aa12.26□□□□□ -0.45
CXCL12-203ENST00000374429 PKN1Q16512 942 aa12.26□□□□□ -0.45
CXCL12-203ENST00000374429 IRX2Q9BZI1 471 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-203ENST00000374429 SMCO2A6NFE2 343 aa12.26□□□□□ -0.45
CXCL12-203ENST00000374429 TEX33O43247 280 aa12.26□□□□□ -0.45
CXCL12-203ENST00000374429 RAD17O75943 681 aa12.26□□□□□ -0.45
CXCL12-203ENST00000374429 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
CXCL12-203ENST00000374429 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-203ENST00000374429 N4BP3O15049 544 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 U2AF2P26368 475 aaKnown RBP eCLIP12.25□□□□□ -0.45
CXCL12-203ENST00000374429 CUL4BQ13620 913 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 SEC23AQ15436 765 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 MAP3K14Q99558 947 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 KANSL2Q9H9L4 492 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 CEP131Q9UPN4 1083 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 RTL9Q8NET4 1388 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 FAM205AQ6ZU69 1335 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 LDHCP07864 332 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 BMP6P22004 513 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 TM4SF1P30408 202 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 TERF1P54274 439 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 TMTC3Q6ZXV5 915 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 FCHSD1Q86WN1 690 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 HOMEZQ8IX15 550 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 TBC1D16Q8TBP0 767 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 TCP10L2B9ZVM9 353 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 PARP1P09874 1014 aaKnown RBP12.25□□□□□ -0.45
CXCL12-203ENST00000374429 MTF1Q14872 753 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 TBC1D10BQ4KMP7 808 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-203ENST00000374429 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 PLA2G4DQ86XP0 818 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 CDK5RAP3Q96JB5 506 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 TMEM60Q9H2L4 133 aa12.25□□□□□ -0.45
CXCL12-203ENST00000374429 BCCIPQ9P287 314 aaKnown RBP eCLIP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 465 ms