RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TBC1D9BQ66K14 1250 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 TRMT44Q8IYL2 757 aaKnown RBP19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 ZNF384Q8TF68 577 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 SHISA4Q96DD7 197 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 CYP2D6P10635 497 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 MTF1Q14872 753 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 TXNRD3Q86VQ6 643 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 HNRNPLLQ8WVV9 542 aaKnown RBP19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 AATFQ9NY61 560 aaKnown RBP eCLIP19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 SPATA31A1Q5TZJ5 1347 aa19.59■□□□□ 0.73
LDLRAP1-201ENST00000374338 PLEKHA8P1O95397 391 aa19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 FBXL16Q8N461 479 aa19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 MAP3K14Q99558 947 aa19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 UBAC1Q9BSL1 405 aa19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 MYH7P12883 1935 aa19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 HNRNPH1P31943 449 aaKnown RBP19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 PDE4BQ07343 736 aa19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 MSL3Q8N5Y2 521 aaKnown RBP19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 TMEM87BQ96K49 555 aa19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 C8orf37Q96NL8 207 aa19.58■□□□□ 0.73
LDLRAP1-201ENST00000374338 ADAMTS3O15072 1205 aa19.58■□□□□ 0.72
LDLRAP1-201ENST00000374338 EIF3JO75822 258 aaKnown RBP19.58■□□□□ 0.72
LDLRAP1-201ENST00000374338 NACAP1Q9BZK3 213 aa19.58■□□□□ 0.72
LDLRAP1-201ENST00000374338 TNKSO95271 1327 aa19.58■□□□□ 0.72
LDLRAP1-201ENST00000374338 SPEF2Q9C093 1822 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 MAGEB6P1A0A0J9YX57 407 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 A0A1W2PQ27 194 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 A0A1W2PQ64 194 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 A0A1W2PQD8 194 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 ERICH2A1L162 156 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 CMA1P23946 247 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 METTL16Q86W50 562 aaKnown RBP19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 ANKRD18AQ8IVF6 992 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 ZNF512BQ96KM6 892 aaPredicted RBP19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 L1RE1Q9UN81 338 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 POLR2DO15514 142 aaKnown RBP19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 ERLIN2O94905 339 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 ZNF654Q8IZM8 581 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 CEP120Q8N960 986 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 FANCLQ9NW38 375 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 PCDHA5Q9Y5H7 936 aa19.57■□□□□ 0.72
LDLRAP1-201ENST00000374338 ZSCAN12O43309 604 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 CDKL5O76039 1030 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 TOP1P11387 765 aaKnown RBP19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 PRDX5P30044 214 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 SAMD1Q6SPF0 538 aaPredicted RBP19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 ABCC12Q96J65 1359 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 LZTFL1Q9NQ48 299 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 V9GY48 417 aaPredicted RBP19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 MYH3P11055 1940 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 MYH15Q9Y2K3 1946 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 KCNV1Q6PIU1 500 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 CCDC12Q8WUD4 166 aaPredicted RBP19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 KCNH3Q9ULD8 1083 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 MINPP1Q9UNW1 487 aa19.56■□□□□ 0.72
LDLRAP1-201ENST00000374338 USP17L12C9JPN9 530 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 USP17L21D6R901 530 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 BMP6P22004 513 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 NOSTRINQ8IVI9 506 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 ANKZF1Q9H8Y5 726 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 INTS13Q9NVM9 706 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 LIG3P49916 1009 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 NLRP12P59046 1061 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 ATL3Q6DD88 541 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 TMEM139Q8IV31 216 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 FANCBQ8NB91 859 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 FAM71BQ8TC56 605 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 PNKPQ96T60 521 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 RHOXF2BP0C7M4 288 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 AFMP43652 599 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 USP5P45974 858 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 RPAINQ86UA6 219 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 KIFC2Q96AC6 838 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 FAM84BQ96KN1 310 aaPredicted RBP19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 RHOXF2Q9BQY4 288 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 SERTAD1Q9UHV2 236 aa19.55■□□□□ 0.72
LDLRAP1-201ENST00000374338 SGMS1Q86VZ5 419 aa19.54■□□□□ 0.72
LDLRAP1-201ENST00000374338 CCDC102AQ96A19 550 aa19.54■□□□□ 0.72
LDLRAP1-201ENST00000374338 FAM204AQ9H8W3 233 aa19.54■□□□□ 0.72
LDLRAP1-201ENST00000374338 ABCB6Q9NP58 842 aa19.54■□□□□ 0.72
LDLRAP1-201ENST00000374338 FMNL1O95466 1100 aaPredicted RBP19.54■□□□□ 0.72
LDLRAP1-201ENST00000374338 ENAHQ8N8S7 591 aaPredicted RBP19.54■□□□□ 0.72
LDLRAP1-201ENST00000374338 MRPL44Q9H9J2 332 aaKnown RBP19.54■□□□□ 0.72
LDLRAP1-201ENST00000374338 DOT1LQ8TEK3 1739 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 COL1A1P02452 1464 aaPredicted RBP19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 HSP90B2PQ58FF3 399 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 FBXW10Q5XX13 1052 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 KLHL10Q6JEL2 608 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 FCHSD1Q86WN1 690 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 TRIM22Q8IYM9 498 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 SMYD4Q8IYR2 804 aaPredicted RBP19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 CRACR2BQ8N4Y2 399 aaPredicted RBP19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 EPSTI1Q96J88 318 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 KRT23Q9C075 422 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 RAB21Q9UL25 225 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 MMP1P03956 469 aa19.53■□□□□ 0.72
LDLRAP1-201ENST00000374338 CDC25AP30304 524 aa19.52■□□□□ 0.72
LDLRAP1-201ENST00000374338 BAG1Q99933 345 aaPredicted RBP19.52■□□□□ 0.72
LDLRAP1-201ENST00000374338 FAM107BQ9H098 131 aa19.52■□□□□ 0.72
LDLRAP1-201ENST00000374338 LIFRP42702 1097 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms