RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.82■■□□□ 1.4
TMEM53-205ENST00000372244 TACC3Q9Y6A5 838 aa23.82■■□□□ 1.4
TMEM53-205ENST00000372244 ZSWIM8A7E2V4 1837 aa23.82■■□□□ 1.4
TMEM53-205ENST00000372244 PEX10O60683 326 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 NEDD1Q8NHV4 660 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 MKL1Q969V6 931 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 INCENPQ9NQS7 918 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 DIAPH3Q9NSV4 1193 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 ZMYM6O95789 1325 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 TNPO2O14787 897 aaKnown RBP23.81■■□□□ 1.4
TMEM53-205ENST00000372244 MYH8P13535 1937 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 PRKCZQ05513 592 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 CTDSPL2Q05D32 466 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 COG2Q14746 738 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 MTMR4Q9NYA4 1195 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 HOXC10Q9NYD6 342 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 GABRQQ9UN88 632 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 RABGAP1Q9Y3P9 1069 aa23.81■■□□□ 1.4
TMEM53-205ENST00000372244 MYPNQ86TC9 1320 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 CNMDO75829 334 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 ERVK-9P63128 1117 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 ERVK-24P63145 666 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 SLC9C1Q4G0N8 1177 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 NBPF11Q86T75 865 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 SPICE1Q8N0Z3 855 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 ZNF333Q96JL9 665 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 GJD2Q9UKL4 321 aa23.8■■□□□ 1.4
TMEM53-205ENST00000372244 SPDYE16A6NNV3 312 aaPredicted RBP23.79■■□□□ 1.4
TMEM53-205ENST00000372244 FLT3LGP49771 235 aa23.79■■□□□ 1.4
TMEM53-205ENST00000372244 TFAP4Q01664 338 aa23.79■■□□□ 1.4
TMEM53-205ENST00000372244 ATP2B2Q01814 1243 aa23.79■■□□□ 1.4
TMEM53-205ENST00000372244 CENPQQ7L2Z9 268 aaPredicted RBP23.79■■□□□ 1.4
TMEM53-205ENST00000372244 COA7Q96BR5 231 aa23.79■■□□□ 1.4
TMEM53-205ENST00000372244 CEP95Q96GE4 821 aa23.79■■□□□ 1.4
TMEM53-205ENST00000372244 GREB1LQ9C091 1923 aaPredicted RBP23.78■■□□□ 1.4
TMEM53-205ENST00000372244 PLIN4Q96Q06 1357 aa23.78■■□□□ 1.4
TMEM53-205ENST00000372244 ORC4O43929 436 aa23.78■■□□□ 1.4
TMEM53-205ENST00000372244 FAM47AQ5JRC9 791 aa23.78■■□□□ 1.4
TMEM53-205ENST00000372244 RAET1EQ8TD07 263 aa23.78■■□□□ 1.4
TMEM53-205ENST00000372244 GOPCQ9HD26 462 aa23.78■■□□□ 1.4
TMEM53-205ENST00000372244 CLIP2Q9UDT6 1046 aa23.78■■□□□ 1.4
TMEM53-205ENST00000372244 SYNPO2Q9UMS6 1093 aa23.78■■□□□ 1.4
TMEM53-205ENST00000372244 DOCK3Q8IZD9 2030 aa23.77■■□□□ 1.4
TMEM53-205ENST00000372244 WDR46O15213 610 aaKnown RBP23.77■■□□□ 1.4
TMEM53-205ENST00000372244 TSPY3P0CV98 308 aa23.77■■□□□ 1.4
TMEM53-205ENST00000372244 TSPY8P0CW00 308 aa23.77■■□□□ 1.4
TMEM53-205ENST00000372244 IRF5Q13568 498 aa23.77■■□□□ 1.4
TMEM53-205ENST00000372244 TANGO6Q9C0B7 1094 aa23.77■■□□□ 1.4
TMEM53-205ENST00000372244 KIAA0100Q14667 2235 aaKnown RBP23.77■■□□□ 1.4
TMEM53-205ENST00000372244 TTLL1O95922 423 aa23.76■■□□□ 1.39
TMEM53-205ENST00000372244 SOX10P56693 466 aa23.76■■□□□ 1.39
TMEM53-205ENST00000372244 SH3TC2Q8TF17 1288 aa23.76■■□□□ 1.39
TMEM53-205ENST00000372244 PAGR1Q9BTK6 254 aa23.76■■□□□ 1.39
TMEM53-205ENST00000372244 BTBD7Q9P203 1132 aa23.76■■□□□ 1.39
TMEM53-205ENST00000372244 F5H6K3 240 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 MAPK4P31152 587 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 GRK4P32298 578 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 DSG3P32926 999 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 KLRC3Q07444 240 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 DSCC1Q9BVC3 393 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 NBPF3Q9H094 633 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 PORCNQ9H237 461 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 IL25Q9H293 177 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 IL17RBQ9NRM6 502 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 ADAMTS5Q9UNA0 930 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 MGAMO43451 1857 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 BRCA2P51587 3418 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 CHMLP26374 656 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 PXYLP1Q8TE99 480 aa23.75■■□□□ 1.39
TMEM53-205ENST00000372244 FLOT1O75955 427 aa23.74■■□□□ 1.39
TMEM53-205ENST00000372244 NOVP48745 357 aa23.74■■□□□ 1.39
TMEM53-205ENST00000372244 MB21D1Q8N884 522 aa23.74■■□□□ 1.39
TMEM53-205ENST00000372244 ADCY3O60266 1144 aa23.73■■□□□ 1.39
TMEM53-205ENST00000372244 NDUFB10O96000 172 aa23.73■■□□□ 1.39
TMEM53-205ENST00000372244 PCP11498 1178 aaKnown RBP23.73■■□□□ 1.39
TMEM53-205ENST00000372244 CCNA1P78396 465 aa23.73■■□□□ 1.39
TMEM53-205ENST00000372244 SLAIN1Q8ND83 568 aa23.73■■□□□ 1.39
TMEM53-205ENST00000372244 RLFQ13129 1914 aa23.72■■□□□ 1.39
TMEM53-205ENST00000372244 TSPY2A6NKD2 308 aa23.72■■□□□ 1.39
TMEM53-205ENST00000372244 RANBP6O60518 1105 aaKnown RBP23.72■■□□□ 1.39
TMEM53-205ENST00000372244 HAND2P61296 217 aa23.72■■□□□ 1.39
TMEM53-205ENST00000372244 PPP4R3BQ5MIZ7 849 aa23.72■■□□□ 1.39
TMEM53-205ENST00000372244 AKNAD1Q5T1N1 836 aa23.72■■□□□ 1.39
TMEM53-205ENST00000372244 GMCL1P1Q8NEA9 526 aa23.72■■□□□ 1.39
TMEM53-205ENST00000372244 STAG1Q8WVM7 1258 aa23.72■■□□□ 1.39
TMEM53-205ENST00000372244 USP6NLQ92738 828 aa23.72■■□□□ 1.39
TMEM53-205ENST00000372244 FAM83BQ5T0W9 1011 aa23.71■■□□□ 1.39
TMEM53-205ENST00000372244 GPR142Q7Z601 462 aa23.71■■□□□ 1.39
TMEM53-205ENST00000372244 ATG4CQ96DT6 458 aa23.71■■□□□ 1.39
TMEM53-205ENST00000372244 TCP11L1Q9NUJ3 509 aa23.71■■□□□ 1.39
TMEM53-205ENST00000372244 FBXO28Q9NVF7 368 aa23.71■■□□□ 1.39
TMEM53-205ENST00000372244 ZNF213O14771 459 aa23.7■■□□□ 1.38
TMEM53-205ENST00000372244 NMT2O60551 498 aa23.7■■□□□ 1.38
TMEM53-205ENST00000372244 MORN1Q5T089 497 aa23.7■■□□□ 1.38
TMEM53-205ENST00000372244 MFSD6Q6ZSS7 791 aa23.7■■□□□ 1.38
TMEM53-205ENST00000372244 PLEKHH3Q7Z736 793 aa23.7■■□□□ 1.38
TMEM53-205ENST00000372244 TBC1D10CQ8IV04 446 aa23.7■■□□□ 1.38
TMEM53-205ENST00000372244 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.38
TMEM53-205ENST00000372244 RAD50Q92878 1312 aa23.7■■□□□ 1.38
TMEM53-205ENST00000372244 POTEFA5A3E0 1075 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms