RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 PSMB7Q99436 277 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 OSBPL7Q9BZF2 842 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 EHD2Q9NZN4 543 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 KCNJ14Q9UNX9 436 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 MEFVO15553 781 aaPredicted RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 MFAP3LO75121 409 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 ANTXR2P58335 489 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 HERVK_113P62684 666 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 HDLBPQ00341 1268 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 CDCA2Q69YH5 1023 aaPredicted RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 DHX32Q7L7V1 743 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 CAGE1Q8TC20 777 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 CALR3Q96L12 384 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 RNPC3Q96LT9 517 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 KDM6AO15550 1401 aaPredicted RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 CTAGE15A4D2H0 777 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 CTAGE9A4FU28 777 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 B4E1Z4 1266 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 EBAG9O00559 213 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 NKRFO15226 690 aaKnown RBP eCLIP9.84□□□□□ -0.836e-8■■■□□ 16.7
SMARCA1-203ENST00000371123 ADAMTS2O95450 1211 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 GCP02774 474 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 CTAGE8P0CG41 777 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 SYKP43405 635 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 QPCTQ16769 361 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 PTPROQ16827 1216 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 ARMC3Q5W041 872 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 TTLL7Q6ZT98 887 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 CTAGE6Q86UF2 777 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 CTAGE4Q8IX94 777 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 SMYD4Q8IYR2 804 aaPredicted RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 VCPKMTQ9H867 229 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 ADD3Q9UEY8 706 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 ROBO1Q9Y6N7 1651 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 SBNO1A3KN83 1393 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 ATP1A2P50993 1020 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 HSPA2P54652 639 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 C2orf54Q08AI8 447 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 MORC3Q14149 939 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 IMMTQ16891 758 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 NAA35Q5VZE5 725 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 ATL3Q6DD88 541 aa9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 TPX2Q9ULW0 747 aaKnown RBP9.84□□□□□ -0.83
SMARCA1-203ENST00000371123 IGSF1Q8N6C5 1336 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 GOLGA6CA6NDK9 693 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 AKR1B15C9JRZ8 316 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 PRC1O43663 620 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 PPP1R12BO60237 982 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 GOLGA6DP0CG33 693 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 PPFIA1Q13136 1202 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 TRADDQ15628 312 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 KRT28Q7Z3Y7 464 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 PARD3BQ8TEW8 1205 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 CAPZA3Q96KX2 299 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 GOLGA6AQ9NYA3 693 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 TRMT112Q9UI30 125 aaKnown RBP9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 U3KPZ7 1027 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 USP31Q70CQ4 1352 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 GOLGA6L9A6NEM1 432 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 KRT14P02533 472 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 TOB1P50616 345 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 EIF4A1P60842 406 aaKnown RBP9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 SKOR1P84550 965 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 NEDD9Q14511 834 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 NT5DC1Q5TFE4 455 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 KCTD16Q68DU8 428 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 TEX11Q8IYF3 940 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 NAPGQ99747 312 aaPredicted RBP9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 ALG1Q9BT22 464 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 ODF2LQ9ULJ1 636 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 OVOS2A0A0G2JMS6 1433 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 ERLIN1O75477 346 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 HSP90B2PQ58FF3 399 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 SMIM5Q71RC9 77 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 FAM76AQ8TAV0 307 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 KCNG4Q8TDN1 519 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 SLF1Q9BQI6 1058 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 FAM107BQ9H098 131 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 RGPD2P0DJD1 1756 aa9.83□□□□□ -0.84
SMARCA1-203ENST00000371123 ATXN2Q99700 1313 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 ZNF233A6NK53 670 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 CBFA2T2O43439 604 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 FAM153BP0C7A2 387 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 CCT6AP40227 531 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 WHAMMP3Q1A5X7 153 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 FAM153CQ494X1 144 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 SHISA4Q96DD7 197 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 PAGR1Q9BTK6 254 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 LACRTQ9GZZ8 138 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 FAM153AQ9UHL3 310 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 ZMYM6O95789 1325 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 BACH1O14867 736 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 AP1G2O75843 785 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 SLC7A5Q01650 507 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 TSR1Q2NL82 804 aaKnown RBP9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 MCMDC2Q4G0Z9 681 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 WDR59Q6PJI9 974 aa9.82□□□□□ -0.84
SMARCA1-203ENST00000371123 CEP120Q8N960 986 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms