RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CLIC4Q9Y696 253 aa13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 STAMBPO95630 424 aa13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 LONP1P36776 959 aaKnown RBP13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 WDR44Q5JSH3 913 aa13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 GSDMAQ96QA5 445 aa13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 FANCLQ9NW38 375 aa13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 PSDA5PKW4 1024 aaPredicted RBP13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 CCDC50Q8IVM0 306 aa13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 H7C1W4 665 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 KLHL30Q0D2K2 578 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 LRMPQ12912 555 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 NEK8Q86SG6 692 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 NLRP10Q86W26 655 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 IFT20Q8IY31 132 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 DHX37Q8IY37 1157 aaKnown RBP13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 IKBKBO14920 756 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 CHMP2AO43633 222 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 OR52Z1P0C646 297 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 GTF2IP78347 998 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 PPP1R14CQ8TAE6 165 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 IFNAR1P17181 557 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 CDC25BP30305 580 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 ADKP55263 362 aaKnown RBP13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 PTGDRQ13258 359 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 KCNJ12Q14500 433 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 PPP1R7Q15435 360 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 C6orf163Q5TEZ5 329 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 LINC00301Q8NCQ3 95 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 MAGEF1Q9HAY2 307 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 TLDC2A0PJX2 215 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 SPOPO43791 374 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 PDE6BP35913 854 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 GPR161Q8N6U8 529 aaKnown RBP13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 OSBP2Q969R2 916 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 LRRC45Q96CN5 670 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 TSNARE1Q96NA8 513 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 USP40Q9NVE5 1235 aa13.18□□□□□ -0.3
DEPDC1-201ENST00000370966 ZEB2O60315 1214 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 STX10O60499 249 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 LIFRP42702 1097 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 NT5C2P49902 561 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 BIRC3Q13489 604 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 MORC3Q14149 939 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 SFMBT2Q5VUG0 894 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CPLX4Q7Z7G2 160 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 OTUD6BQ8N6M0 293 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 TMEM87AQ8NBN3 555 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CLIC6Q96NY7 704 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 ZNF804BA4D1E1 1349 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 FMNL1O95466 1100 aaPredicted RBP13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 KIF23Q02241 960 aaPredicted RBP13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 INF2Q27J81 1249 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 MYOCDQ8IZQ8 938 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CHURC1Q8WUH1 139 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 STK32BQ9NY57 414 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 KCNG1Q9UIX4 513 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 LEMD3Q9Y2U8 911 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 GJC1P36383 396 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 MNAT1P51948 309 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CFAP221Q4G0U5 840 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 USP21Q9UK80 565 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 GLI2P10070 1586 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CLUL1Q15846 466 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 WHAMMP3Q1A5X7 153 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CEP128Q6ZU80 1094 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CROCCP2Q86T23 111 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 CUEDC2Q9H467 287 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
DEPDC1-201ENST00000370966 SPHKAPQ2M3C7 1700 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 LAD1O00515 517 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 EXOC3O60645 756 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 CCDC121Q6ZUS5 278 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 UBL4BQ8N7F7 174 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 BIN2Q9UBW5 565 aaPredicted RBP13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 SAR1BQ9Y6B6 198 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 BRD3Q15059 726 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 UTP14CQ5TAP6 766 aaKnown RBP13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 SYCE1Q8N0S2 351 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 MYCT1Q8N699 235 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 TRIM58Q8NG06 486 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 FAM207AQ9NSI2 230 aaPredicted RBP13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 PKD2L1Q9P0L9 805 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 M0R2C6 588 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 CFBP00751 764 aa13.16□□□□□ -0.3
DEPDC1-201ENST00000370966 BCRP11274 1271 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms