RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 PALM3A6NDB9 673 aaPredicted RBP26.89■■□□□ 1.89
SDF4-202ENST00000360001 GDF11O95390 407 aa26.89■■□□□ 1.89
SDF4-202ENST00000360001 TNFAIP1Q13829 316 aa26.89■■□□□ 1.89
SDF4-202ENST00000360001 RASGRP2Q7LDG7 609 aa26.89■■□□□ 1.89
SDF4-202ENST00000360001 MTMR7Q9Y216 660 aa26.89■■□□□ 1.89
SDF4-202ENST00000360001 MYH4Q9Y623 1939 aa26.89■■□□□ 1.89
SDF4-202ENST00000360001 TBC1D12O60347 775 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 PTMSP20962 102 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 ABCB5Q2M3G0 1257 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 TMEM179Q6ZVK1 233 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 LRRC47Q8N1G4 583 aaKnown RBP26.88■■□□□ 1.89
SDF4-202ENST00000360001 TRPM4Q8TD43 1214 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 CNPY2Q9Y2B0 182 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 V9GY48 417 aaPredicted RBP26.88■■□□□ 1.89
SDF4-202ENST00000360001 JAG1P78504 1218 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 PKN1Q16512 942 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 PPP4R3BQ5MIZ7 849 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 KRT40Q6A162 431 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 TEPSINQ96N21 525 aa26.88■■□□□ 1.89
SDF4-202ENST00000360001 DDNO94850 711 aaPredicted RBP26.87■■□□□ 1.89
SDF4-202ENST00000360001 EPS15P42566 896 aa26.87■■□□□ 1.89
SDF4-202ENST00000360001 GNAQP50148 359 aa26.87■■□□□ 1.89
SDF4-202ENST00000360001 AKAP17AQ02040 695 aaKnown RBP26.87■■□□□ 1.89
SDF4-202ENST00000360001 SEPT2Q15019 361 aa26.87■■□□□ 1.89
SDF4-202ENST00000360001 KANSL2Q9H9L4 492 aa26.87■■□□□ 1.89
SDF4-202ENST00000360001 BAZ2BQ9UIF8 2168 aaKnown RBP26.87■■□□□ 1.89
SDF4-202ENST00000360001 PRPF40AO75400 957 aaKnown RBP26.86■■□□□ 1.89
SDF4-202ENST00000360001 MAP3K10Q02779 954 aa26.86■■□□□ 1.89
SDF4-202ENST00000360001 GDPD2Q9HCC8 539 aa26.86■■□□□ 1.89
SDF4-202ENST00000360001 MYH15Q9Y2K3 1946 aa26.86■■□□□ 1.89
SDF4-202ENST00000360001 hCG_1642624A0A1W2PR95 340 aa26.86■■□□□ 1.89
SDF4-202ENST00000360001 NYAP2Q9P242 653 aa26.86■■□□□ 1.89
SDF4-202ENST00000360001 GH2P01242 217 aa26.85■■□□□ 1.89
SDF4-202ENST00000360001 PDHBP11177 359 aa26.85■■□□□ 1.89
SDF4-202ENST00000360001 TRIM29Q14134 588 aa26.85■■□□□ 1.89
SDF4-202ENST00000360001 SLC35G1Q2M3R5 365 aa26.85■■□□□ 1.89
SDF4-202ENST00000360001 USP17L2Q6R6M4 530 aa26.85■■□□□ 1.89
SDF4-202ENST00000360001 USP17L5A8MUK1 530 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 PARP1P09874 1014 aaKnown RBP26.84■■□□□ 1.89
SDF4-202ENST00000360001 GOLGA8HP0CJ92 632 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 SNHG28P0DPA3 235 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 EEF2P13639 858 aaKnown RBP26.84■■□□□ 1.89
SDF4-202ENST00000360001 KIF23Q02241 960 aaPredicted RBP26.84■■□□□ 1.89
SDF4-202ENST00000360001 MIGA2Q7L4E1 593 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 SIAH1Q8IUQ4 282 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 MKL1Q969V6 931 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 TRAK2O60296 914 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 NCLP19338 710 aaKnown RBP26.84■■□□□ 1.89
SDF4-202ENST00000360001 ATP2B2Q01814 1243 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 GPR162Q16538 588 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 TMEM87AQ8NBN3 555 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 LZTS2Q9BRK4 669 aa26.84■■□□□ 1.89
SDF4-202ENST00000360001 KLRF2D3W0D1 207 aa26.83■■□□□ 1.89
SDF4-202ENST00000360001 HIRAP54198 1017 aaPredicted RBP26.83■■□□□ 1.89
SDF4-202ENST00000360001 ICA1Q05084 483 aa26.83■■□□□ 1.89
SDF4-202ENST00000360001 DEFB129Q9H1M3 183 aa26.83■■□□□ 1.89
SDF4-202ENST00000360001 CABP5Q9NP86 173 aa26.83■■□□□ 1.89
SDF4-202ENST00000360001 KIF28PB7ZC32 967 aa26.82■■□□□ 1.88
SDF4-202ENST00000360001 CYTH3O43739 400 aa26.82■■□□□ 1.88
SDF4-202ENST00000360001 KRT85P78386 507 aa26.82■■□□□ 1.88
SDF4-202ENST00000360001 USP48Q86UV5 1035 aa26.82■■□□□ 1.88
SDF4-202ENST00000360001 SHISA4Q96DD7 197 aa26.82■■□□□ 1.88
SDF4-202ENST00000360001 ANGEL2Q5VTE6 544 aaKnown RBP26.82■■□□□ 1.88
SDF4-202ENST00000360001 FIBPO43427 364 aa26.81■■□□□ 1.88
SDF4-202ENST00000360001 SPZ1Q9BXG8 430 aa26.81■■□□□ 1.88
SDF4-202ENST00000360001 RBM27Q9P2N5 1060 aaKnown RBP26.81■■□□□ 1.88
SDF4-202ENST00000360001 KCNJ14Q9UNX9 436 aa26.81■■□□□ 1.88
SDF4-202ENST00000360001 MMP1P03956 469 aa26.8■■□□□ 1.88
SDF4-202ENST00000360001 PFKFB3Q16875 520 aaPredicted RBP26.8■■□□□ 1.88
SDF4-202ENST00000360001 ASPRV1Q53RT3 343 aa26.8■■□□□ 1.88
SDF4-202ENST00000360001 APOBEC3FQ8IUX4 373 aaKnown RBP26.8■■□□□ 1.88
SDF4-202ENST00000360001 SCG2P13521 617 aa26.8■■□□□ 1.88
SDF4-202ENST00000360001 BRAPQ7Z569 592 aa26.8■■□□□ 1.88
SDF4-202ENST00000360001 VPS54Q9P1Q0 977 aa26.8■■□□□ 1.88
SDF4-202ENST00000360001 TFIP11Q9UBB9 837 aaKnown RBP26.8■■□□□ 1.88
SDF4-202ENST00000360001 ZBTB21Q9ULJ3 1066 aa26.8■■□□□ 1.88
SDF4-202ENST00000360001 SMARCA1P28370 1054 aa26.79■■□□□ 1.88
SDF4-202ENST00000360001 SKOR2Q2VWA4 1001 aaPredicted RBP26.79■■□□□ 1.88
SDF4-202ENST00000360001 PIBF1Q8WXW3 757 aa26.79■■□□□ 1.88
SDF4-202ENST00000360001 CPVLQ9H3G5 476 aa26.79■■□□□ 1.88
SDF4-202ENST00000360001 GGA3Q9NZ52 723 aa26.79■■□□□ 1.88
SDF4-202ENST00000360001 FRMPD2Q68DX3 1309 aaPredicted RBP26.79■■□□□ 1.88
SDF4-202ENST00000360001 VEGFAP15692 232 aaPredicted RBP26.78■■□□□ 1.88
SDF4-202ENST00000360001 U2AF2P26368 475 aaKnown RBP eCLIP26.78■■□□□ 1.88
SDF4-202ENST00000360001 LMOD1P29536 600 aaPredicted RBP26.78■■□□□ 1.88
SDF4-202ENST00000360001 ZNF543Q08ER8 600 aa26.78■■□□□ 1.88
SDF4-202ENST00000360001 XBP1P17861 261 aa26.78■■□□□ 1.88
SDF4-202ENST00000360001 CAP2P40123 477 aa26.78■■□□□ 1.88
SDF4-202ENST00000360001 ADARB2Q9NS39 739 aaKnown RBP26.78■■□□□ 1.88
SDF4-202ENST00000360001 PHF20L1A8MW92 1017 aa26.77■■□□□ 1.88
SDF4-202ENST00000360001 PHF20Q9BVI0 1012 aa26.77■■□□□ 1.88
SDF4-202ENST00000360001 GRIN3BO60391 1043 aa26.77■■□□□ 1.88
SDF4-202ENST00000360001 NBPF12Q5TAG4 269 aaPredicted RBP26.77■■□□□ 1.88
SDF4-202ENST00000360001 DIS3L2Q8IYB7 885 aaKnown RBP26.77■■□□□ 1.88
SDF4-202ENST00000360001 SCAND2PQ9GZW5 306 aaPredicted RBP26.77■■□□□ 1.88
SDF4-202ENST00000360001 GADD45BO75293 160 aaPredicted RBP26.76■■□□□ 1.87
SDF4-202ENST00000360001 SAFBQ15424 915 aaKnown RBP eCLIP26.76■■□□□ 1.87
SDF4-202ENST00000360001 CSPP1Q1MSJ5 1256 aa26.76■■□□□ 1.87
SDF4-202ENST00000360001 ATL3Q6DD88 541 aa26.76■■□□□ 1.87
SDF4-202ENST00000360001 UBA5Q9GZZ9 404 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms