RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 RIMBP2O15034 1052 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 TPM4P67936 248 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 DRC7Q8IY82 874 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 SPC24Q8NBT2 197 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 CNNM3Q8NE01 707 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 NEDD1Q8NHV4 660 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 ERCC4Q92889 916 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 TNFRSF25Q93038 417 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 MRFAP1L1Q96HT8 127 aa20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-203ENST00000359895 SNED1Q8TER0 1413 aa20.96■□□□□ 0.95
PDLIM7-203ENST00000359895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-203ENST00000359895 SMTNL1A8MU46 457 aa20.96■□□□□ 0.95
PDLIM7-203ENST00000359895 TRAPPC10P48553 1259 aa20.96■□□□□ 0.95
PDLIM7-203ENST00000359895 NLRP5P59047 1200 aa20.96■□□□□ 0.95
PDLIM7-203ENST00000359895 AOPEPQ8N6M6 819 aa20.96■□□□□ 0.95
PDLIM7-203ENST00000359895 FERMT2Q96AC1 680 aa20.96■□□□□ 0.95
PDLIM7-203ENST00000359895 DAGLAQ9Y4D2 1042 aa20.96■□□□□ 0.95
PDLIM7-203ENST00000359895 BAZ2BQ9UIF8 2168 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 USP17L3A6NCW0 530 aa20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 USP17L4A6NCW7 530 aa20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 NPY5RQ15761 445 aa20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 DPCR1Q3MIW9 517 aa20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 KANK3Q6NY19 840 aa20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 USP17L1Q7RTZ2 530 aa20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 PIBF1Q8WXW3 757 aa20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 TTC12Q9H892 705 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-203ENST00000359895 ATP2B1P20020 1258 aa20.94■□□□□ 0.94
PDLIM7-203ENST00000359895 SLC44A5Q8NCS7 719 aa20.94■□□□□ 0.94
PDLIM7-203ENST00000359895 CCDC34Q96HJ3 373 aa20.94■□□□□ 0.94
PDLIM7-203ENST00000359895 TMEM47Q9BQJ4 181 aa20.94■□□□□ 0.94
PDLIM7-203ENST00000359895 MAD2L2Q9UI95 211 aa20.94■□□□□ 0.94
PDLIM7-203ENST00000359895 G3V3G9 751 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 LONRF3Q496Y0 759 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 TTC38Q5R3I4 469 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 DCAF8Q5TAQ9 597 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 ZNF830Q96NB3 372 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 GALNT17Q6IS24 598 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 METTL16Q86W50 562 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 CCDC148Q8NFR7 591 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 FBXW7Q969H0 707 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 CLIP2Q9UDT6 1046 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 STX8Q9UNK0 236 aa20.93■□□□□ 0.94
PDLIM7-203ENST00000359895 PLIN4Q96Q06 1357 aa20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 A0A087WWV3 80 aa20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 PALM3A6NDB9 673 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 FAM205CA6NFA0 338 aa20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 BIN1O00499 593 aa20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 IKBKBO14920 756 aa20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 TOP1P11387 765 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 EARS2Q5JPH6 523 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 STYK1Q6J9G0 422 aa20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 SRCAPQ6ZRS2 3230 aa20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 STAG2Q8N3U4 1231 aa20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 NAP1L5Q96NT1 182 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-203ENST00000359895 SMARCA1P28370 1054 aa20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 PNOCQ13519 176 aa20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 HHIPL2Q6UWX4 724 aa20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 OLFM4Q6UX06 510 aa20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 BLIDQ8IZY5 108 aa20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 SPZ1Q9BXG8 430 aa20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 CSRNP2Q9H175 543 aa20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 PCDHA4Q9UN74 947 aa20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 TTF2Q9UNY4 1162 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-203ENST00000359895 NOVP48745 357 aa20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 MDM2Q00987 491 aaPredicted RBP20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 GRIN1Q05586 938 aa20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 PODNQ7Z5L7 613 aa20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 C2CD5Q86YS7 1000 aa20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 CERS5Q8N5B7 392 aa20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 DAGLBQ8NCG7 672 aa20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 ZNF622Q969S3 477 aaKnown RBP eCLIP20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 MYO3BQ8WXR4 1341 aa20.9■□□□□ 0.94
PDLIM7-203ENST00000359895 H0YIN7 160 aa20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 POLR2DO15514 142 aaKnown RBP20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 PTGS1P23219 599 aa20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 FKBP1AP62942 108 aaKnown RBP20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 ATP2C1P98194 919 aaPredicted RBP20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 POSTNQ15063 836 aa20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 SPECC1Q5M775 1068 aa20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 CCDC186Q7Z3E2 898 aa20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 KCNF1Q9H3M0 494 aa20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 SWAP70Q9UH65 585 aa20.89■□□□□ 0.94
PDLIM7-203ENST00000359895 PSDA5PKW4 1024 aaPredicted RBP20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 MYO1BO43795 1136 aa20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 PARP1P09874 1014 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 TERF1P54274 439 aa20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 NOLC1Q14978 699 aaKnown RBP eCLIP20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 DOK7Q18PE1 504 aa20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 PIK3AP1Q6ZUJ8 805 aa20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 TRIML1Q8N9V2 468 aa20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 TEKT1Q969V4 418 aa20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 PYM1Q9BRP8 204 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 SERTAD1Q9UHV2 236 aa20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 PCDHA5Q9Y5H7 936 aa20.89■□□□□ 0.93
PDLIM7-203ENST00000359895 C10orf71Q711Q0 1435 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 ADAMTSL1Q8N6G6 1762 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 SLX4Q8IY92 1834 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 KLRF2D3W0D1 207 aa20.88■□□□□ 0.93
PDLIM7-203ENST00000359895 NEMFO60524 1076 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms