RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 DYDC2Q96IM9 177 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 RAB17Q9H0T7 212 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 ENC1O14682 589 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 ZNF174Q15697 407 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 MINDY4BA8MYZ0 360 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 DTNBO60941 627 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 CUL5Q93034 780 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 SYCP3Q8IZU3 236 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 RTEL1Q9NZ71 1219 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 CEP70Q8NHQ1 597 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 FAM210AQ96ND0 272 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 ASIC3Q9UHC3 531 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 INTS1Q8N201 2190 aaKnown RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 SPATA31E1Q6ZUB1 1445 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 OLFM3Q96PB7 478 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 KRT12Q99456 494 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 HEXIM1O94992 359 aaKnown RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 CALML3P27482 149 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 NBPF10Q6P3W6 841 aaKnown RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 HPCAL4Q9UM19 191 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 PA2G4Q9UQ80 394 aaKnown RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 AMOTL2Q9Y2J4 779 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 ADGRF5Q8IZF2 1346 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 PFKFB2O60825 505 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 NAIF1Q69YI7 327 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-203ENST00000358544 BCAP29Q9UHQ4 241 aa6.7□□□□□ -1.34
VPS13B-203ENST00000358544 CABP4P57796 275 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 UAP1Q16222 522 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 SPATA1Q5VX52 437 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 PPP1R21Q6ZMI0 780 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 CFAP73A6NFT4 308 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 AEBP2Q6ZN18 517 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 TPCN1Q9ULQ1 816 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 PAIP2BQ9ULR5 123 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 SATB2Q9UPW6 733 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 FHOD1Q9Y613 1164 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 SOWAHDA6NJG2 315 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 CDC5LQ99459 802 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 PLIN2Q99541 437 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 PLCB3Q01970 1234 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 IFIT5Q13325 482 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 MIS12Q9H081 205 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 FAM207AQ9NSI2 230 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 ABCC2Q92887 1545 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 CNNM4Q6P4Q7 775 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 CHST3Q7LGC8 479 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 ECT2Q9H8V3 914 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 CITO14578 2027 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 UHRF1BP1Q6BDS2 1440 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 CASP14P31944 242 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 VSNL1P62760 191 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 SLC40A1Q9NP59 571 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 G3BP2Q9UN86 482 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 ZNF521Q96K83 1311 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 POLR2DO15514 142 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 RBM6P78332 1123 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 TMTC2Q8N394 836 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 NUDCD1Q96RS6 583 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 LSM14BQ9BX40 385 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 LSG1Q9H089 658 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 CACNA1HO95180 2353 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 TARSL2A2RTX5 802 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 PPP1R2P41236 205 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 FERMT1Q9BQL6 677 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 DDX23Q9BUQ8 820 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 STMN1P16949 149 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 PCYT1AP49585 367 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 PHEXP78562 749 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 KIFAP3Q92845 792 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 SYNCQ9H7C4 482 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 ERCC5P28715 1186 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-203ENST00000358544 CCDC144BQ3MJ40 725 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 LRRC8CQ8TDW0 803 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 MYH8P13535 1937 aa6.69□□□□□ -1.34
VPS13B-203ENST00000358544 DIAPH2O60879 1101 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 GMNNO75496 209 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 IL9RQ01113 521 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 C2CD5Q86YS7 1000 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 ZSWIM6Q9HCJ5 1215 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 PDHA1P08559 390 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 IGHMBP2P38935 993 aaKnown RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 UBE3BQ7Z3V4 1068 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 SLC4A4Q9Y6R1 1079 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 EIF3HO15372 352 aaKnown RBP eCLIP6.68□□□□□ -1.341e-6■■■■■ 27.4
VPS13B-203ENST00000358544 PLA2G4DQ86XP0 818 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 BICD1Q96G01 975 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 EPC1Q9H2F5 836 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 PARP2Q9UGN5 583 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 MYO1FO00160 1098 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 SART1O43290 800 aaKnown RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 USP14P54578 494 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 GUCY1A3Q02108 690 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 C6orf118Q5T5N4 469 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 ZFATQ9P243 1243 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 LMNAP02545 664 aaKnown RBP6.68□□□□□ -1.34
VPS13B-203ENST00000358544 TNFAIP3P21580 790 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 EHHADHQ08426 723 aa6.68□□□□□ -1.34
VPS13B-203ENST00000358544 ZNF827Q17R98 1081 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms