RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 NKD2Q969F2 451 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-205ENST00000350435 USP40Q9NVE5 1235 aa11.42□□□□□ -0.58
UBE2D3-205ENST00000350435 MAP1BP46821 2468 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-205ENST00000350435 SETXQ7Z333 2677 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 TLR3O15455 904 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 LPXNO60711 386 aa11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 KDM4AO75164 1064 aa11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 PGK1P00558 417 aa11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 IGHA2P01877 340 aa11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 NEXNQ0ZGT2 675 aa11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 IFIT5Q13325 482 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 PUM1Q14671 1186 aaKnown RBP eCLIP11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 TSEN34Q9BSV6 310 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 PLA2G12BQ9BX93 195 aa11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 OSBPL5Q9H0X9 879 aaPredicted RBP11.41□□□□□ -0.58
UBE2D3-205ENST00000350435 WDR87Q6ZQQ6 2873 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 ZNF236Q9UL36 1845 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 H7C1W4 665 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 ENTPD3O75355 529 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 IGKV5-2P06315 115 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 SLURP2P0DP57 97 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 HSPA5P11021 654 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 RGS3P49796 1198 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 ACLYP53396 1101 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 MTMR2Q13614 643 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 PRAMEF19Q5SWL8 479 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 RPUSD2Q8IZ73 545 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 POP1Q99575 1024 aaKnown RBP11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 MAP3K2Q9Y2U5 619 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 RABGAP1Q9Y3P9 1069 aa11.4□□□□□ -0.58
UBE2D3-205ENST00000350435 GVINP1Q7Z2Y8 2422 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 H3BQ06 376 aaPredicted RBP11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 AVPR2P30518 371 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 VCPP55072 806 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 LDHAL6AQ6ZMR3 332 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 RNF135Q8IUD6 432 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 NEK9Q8TD19 979 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 GDPD5Q8WTR4 605 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 PLEKHF1Q96S99 279 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 IGSF5Q9NSI5 407 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 CHMP3Q9Y3E7 222 aa11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 LAS1LQ9Y4W2 734 aaKnown RBP11.39□□□□□ -0.59
UBE2D3-205ENST00000350435 DDTLA6NHG4 134 aaPredicted RBP11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 MOXD2PA6NHM9 499 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 KIF28PB7ZC32 967 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 NUBP1P53384 320 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 BACE1P56817 501 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 CWF19L2Q2TBE0 894 aaKnown RBP11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 CAVIN4Q5BKX8 364 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 TAF7LQ5H9L4 462 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 MCTP2Q6DN12 878 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 SH3BP5LQ7L8J4 393 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 GLT1D1Q96MS3 346 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 PNNQ9H307 717 aaKnown RBP11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 SLC5A4Q9NY91 659 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 ZNF292O60281 2723 aa11.38□□□□□ -0.59
UBE2D3-205ENST00000350435 FAM208BQ5VWN6 2430 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 CDK7P50613 346 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 RIPK4P57078 832 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 GCKRQ14397 625 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 FBXO33Q7Z6M2 555 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 VTI1AQ96AJ9 217 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 IDI2Q9BXS1 227 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 HIPK3Q9H422 1215 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 FASNP49327 2511 aaKnown RBP11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 MYH2Q9UKX2 1941 aa11.37□□□□□ -0.59
UBE2D3-205ENST00000350435 ELP1O95163 1332 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 NEURL1BA8MQ27 555 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 C19orf81C9J6K1 198 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 CHL1O00533 1208 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 TBC1D12O60347 775 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 ARHGEF15O94989 841 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 ADORA2AP29274 412 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 CCL23P55773 120 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 LMOD3Q0VAK6 560 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 DUSP27Q5VZP5 1158 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 SLC9A7Q96T83 725 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 WDR18Q9BV38 432 aa11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 ZNFX1Q9P2E3 1918 aaKnown RBP11.36□□□□□ -0.59
UBE2D3-205ENST00000350435 COL11A1P12107 1806 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 USP24Q9UPU5 2620 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 FAM196BA6NMK8 535 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 ARVCFO00192 962 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 GALR2O43603 387 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 CNMDO75829 334 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 CAP2P40123 477 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 EP400NLQ6ZTU2 488 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 FRMD5Q7Z6J6 570 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 FAM126BQ8IXS8 530 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 CHAMP1Q96JM3 812 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 SH2B1Q9NRF2 756 aaPredicted RBP11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 TIMELESSQ9UNS1 1208 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 SIP14410 1827 aa11.35□□□□□ -0.59
UBE2D3-205ENST00000350435 A0A0U1RQG5 324 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 USP17L10C9JJH3 530 aa11.34□□□□□ -0.59
UBE2D3-205ENST00000350435 STRNO43815 780 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms