RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 FAM47AQ5JRC9 791 aa18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 RRP12Q5JTH9 1297 aaKnown RBP18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 SIAH1Q8IUQ4 282 aa18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 STAG1Q8WVM7 1258 aa18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 TRIM47Q96LD4 638 aa18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 PLIN4Q96Q06 1357 aa18.25■□□□□ 0.51
TNFRSF12A-202ENST00000341627 GNRH1P01148 92 aa18.24■□□□□ 0.51
TNFRSF12A-202ENST00000341627 PSMC4P43686 418 aa18.24■□□□□ 0.51
TNFRSF12A-202ENST00000341627 TBC1D10CQ8IV04 446 aa18.24■□□□□ 0.51
TNFRSF12A-202ENST00000341627 LPAR1Q92633 364 aa18.24■□□□□ 0.51
TNFRSF12A-202ENST00000341627 GOPCQ9HD26 462 aa18.24■□□□□ 0.51
TNFRSF12A-202ENST00000341627 INCENPQ9NQS7 918 aa18.24■□□□□ 0.51
TNFRSF12A-202ENST00000341627 NYAP2Q9P242 653 aa18.24■□□□□ 0.51
TNFRSF12A-202ENST00000341627 PTCH2Q9Y6C5 1203 aa18.24■□□□□ 0.51
TNFRSF12A-202ENST00000341627 IGKV6D-41A0A0C4DH26 115 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L15C9J2P7 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L13C9JLJ4 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L11C9JVI0 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L18D6R9N7 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L22D6RA61 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L17D6RBQ6 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L19D6RCP7 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L20D6RJB6 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 ECM2O94769 699 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 TTLL1O95922 423 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 VCAM1P19320 739 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 PTH1RQ03431 593 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 USP17L24Q0WX57 530 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 ARMC5Q96C12 935 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 CEP95Q96GE4 821 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 NBPF3Q9H094 633 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 ASCC2Q9H1I8 757 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 VCPKMTQ9H867 229 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 GREB1LQ9C091 1923 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF12A-202ENST00000341627 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF12A-202ENST00000341627 ESR2Q92731 530 aa18.22■□□□□ 0.51
TNFRSF12A-202ENST00000341627 MAP4K1Q92918 833 aa18.22■□□□□ 0.51
TNFRSF12A-202ENST00000341627 CLIP2Q9UDT6 1046 aa18.22■□□□□ 0.51
TNFRSF12A-202ENST00000341627 SYNPO2Q9UMS6 1093 aa18.22■□□□□ 0.51
TNFRSF12A-202ENST00000341627 TACC3Q9Y6A5 838 aa18.22■□□□□ 0.51
TNFRSF12A-202ENST00000341627 KRT23Q9C075 422 aa18.21■□□□□ 0.51
TNFRSF12A-202ENST00000341627 RPAP3Q9H6T3 665 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF12A-202ENST00000341627 CNNM2Q9H8M5 875 aa18.21■□□□□ 0.51
TNFRSF12A-202ENST00000341627 ANO2Q9NQ90 1003 aa18.21■□□□□ 0.51
TNFRSF12A-202ENST00000341627 SRRDQ9UH36 339 aa18.21■□□□□ 0.51
TNFRSF12A-202ENST00000341627 LAMA4Q16363 1823 aa18.21■□□□□ 0.51
TNFRSF12A-202ENST00000341627 WDR46O15213 610 aaKnown RBP18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 RAD21O60216 631 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 FMNL1O95466 1100 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 PRMT2P55345 433 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 MLLT1Q03111 559 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 CATSPERGQ6ZRH7 1159 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 SPICE1Q8N0Z3 855 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 ANKRD13CQ8N6S4 541 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 GTF3C2Q8WUA4 911 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 MKL1Q969V6 931 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 LSG1Q9H089 658 aaKnown RBP18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 STX8Q9UNK0 236 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 RBM8AQ9Y5S9 174 aaKnown RBP18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 BRCA2P51587 3418 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 NEDD4P46934 1319 aa18.2■□□□□ 0.5
TNFRSF12A-202ENST00000341627 FCGRTP55899 365 aa18.19■□□□□ 0.5
TNFRSF12A-202ENST00000341627 HERVK_113P62684 666 aa18.19■□□□□ 0.5
TNFRSF12A-202ENST00000341627 TRDNQ13061 729 aa18.19■□□□□ 0.5
TNFRSF12A-202ENST00000341627 ZNF333Q96JL9 665 aa18.19■□□□□ 0.5
TNFRSF12A-202ENST00000341627 P2RX7Q99572 595 aaKnown RBP18.19■□□□□ 0.5
TNFRSF12A-202ENST00000341627 TANGO6Q9C0B7 1094 aa18.19■□□□□ 0.5
TNFRSF12A-202ENST00000341627 TCP11L1Q9NUJ3 509 aa18.19■□□□□ 0.5
TNFRSF12A-202ENST00000341627 F5H6K3 240 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 CYP21A2P08686 494 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 HOXD10P28358 340 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 KLRC3Q07444 240 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 FAM110CQ1W6H9 321 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 SLC9C1Q4G0N8 1177 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 CCDC178Q5BJE1 867 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 KIAA1755Q5JYT7 1200 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 POTEEQ6S8J3 1075 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 IQCA1Q86XH1 822 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 IL17RBQ9NRM6 502 aa18.18■□□□□ 0.5
TNFRSF12A-202ENST00000341627 B4E1Z4 1266 aa18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 NMT2O60551 498 aa18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 KDM4AO75164 1064 aa18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 PRKCZQ05513 592 aa18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 COG2Q14746 738 aa18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 LRRC47Q8N1G4 583 aaKnown RBP18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 GMCL1P1Q8NEA9 526 aa18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 TTC14Q96N46 770 aa18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 HOXC10Q9NYD6 342 aa18.17■□□□□ 0.5
TNFRSF12A-202ENST00000341627 POTEFA5A3E0 1075 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 NDUFB10O96000 172 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 NOVP48745 357 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 NBPF11Q86T75 865 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 SH3TC2Q8TF17 1288 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 MORF4L1Q9UBU8 362 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 GABRQQ9UN88 632 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 MYPNQ86TC9 1320 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 ZSWIM8A7E2V4 1837 aa18.16■□□□□ 0.5
TNFRSF12A-202ENST00000341627 PEX10O60683 326 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms