RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 H0YIN7 160 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 AOC3Q16853 763 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 RESP18Q5W5W9 173 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 C16orf86Q6ZW13 317 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 DGKHQ86XP1 1220 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 FOXP4Q8IVH2 680 aaPredicted RBP17.76■□□□□ 0.43
MBD1-203ENST00000339998 KRI1Q8N9T8 703 aaKnown RBP17.76■□□□□ 0.43
MBD1-203ENST00000339998 HPSEQ9Y251 543 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 LRRC37AA6NMS7 1700 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 CTAGE5O15320 804 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 RILPL1Q5EBL4 403 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 DHX40Q8IX18 779 aaKnown RBP17.76■□□□□ 0.43
MBD1-203ENST00000339998 FAM163AQ96GL9 167 aaPredicted RBP17.76■□□□□ 0.43
MBD1-203ENST00000339998 CSRNP2Q9H175 543 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 KCNH3Q9ULD8 1083 aa17.76■□□□□ 0.43
MBD1-203ENST00000339998 DDX60LQ5H9U9 1706 aaKnown RBP17.76■□□□□ 0.43
MBD1-203ENST00000339998 DLEC1Q9Y238 1755 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 LRRC47Q8N1G4 583 aaKnown RBP17.75■□□□□ 0.43
MBD1-203ENST00000339998 EPSTI1Q96J88 318 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 UBA5Q9GZZ9 404 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.75■□□□□ 0.43
MBD1-203ENST00000339998 ROBO3Q96MS0 1386 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 RBM5P52756 815 aaKnown RBP eCLIP17.75■□□□□ 0.43
MBD1-203ENST00000339998 PPP2R5BQ15173 497 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 CDC42EP5Q6NZY7 148 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 CAMKK2Q96RR4 588 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 TMX4Q9H1E5 349 aaPredicted RBP17.75■□□□□ 0.43
MBD1-203ENST00000339998 SCN9AQ15858 1988 aa17.75■□□□□ 0.43
MBD1-203ENST00000339998 POLR2DO15514 142 aaKnown RBP17.74■□□□□ 0.43
MBD1-203ENST00000339998 AKR1B1P15121 316 aa17.74■□□□□ 0.43
MBD1-203ENST00000339998 XBP1P17861 261 aa17.74■□□□□ 0.43
MBD1-203ENST00000339998 CASP1P29466 404 aa17.74■□□□□ 0.43
MBD1-203ENST00000339998 APOBEC3HQ6NTF7 200 aaKnown RBP17.74■□□□□ 0.43
MBD1-203ENST00000339998 METTL16Q86W50 562 aaKnown RBP17.74■□□□□ 0.43
MBD1-203ENST00000339998 JMYQ8N9B5 988 aa17.74■□□□□ 0.43
MBD1-203ENST00000339998 FRMPD2Q68DX3 1309 aaPredicted RBP17.74■□□□□ 0.43
MBD1-203ENST00000339998 C21orf2O43822 256 aa17.74■□□□□ 0.43
MBD1-203ENST00000339998 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
MBD1-203ENST00000339998 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.74■□□□□ 0.43
MBD1-203ENST00000339998 CUTAO60888 179 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 PRR29P0C7W0 189 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 PTPREP23469 700 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 TMC4Q7Z404 712 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 TNFRSF25Q93038 417 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 A0A087X0B3 334 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 BECN2A8MW95 431 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 CDC25AP30304 524 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 DRC7Q8IY82 874 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 ANO10Q9NW15 660 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 NRXN2Q9P2S2 1712 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 TRIM75PA6NK02 468 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 USP17L5A8MUK1 530 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 KLRF2D3W0D1 207 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 ZBTB22O15209 634 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 PLCG2P16885 1265 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 KIF5BP33176 963 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 MCM7P33993 719 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 GRM4Q14833 912 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 CNNM3Q8NE01 707 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 KCNF1Q9H3M0 494 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 SERTAD1Q9UHV2 236 aa17.73■□□□□ 0.43
MBD1-203ENST00000339998 GOLGA6L19H0YKK7 550 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 ECE2O60344 883 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 PTGS1P23219 599 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 WWC2Q6AWC2 1192 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 STAMQ92783 540 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 CRKP46108 304 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 PTPN21Q16825 1174 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 HS1BP3Q53T59 392 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 HSP90AA4PQ58FG1 418 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 SLF2Q8IX21 1173 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 NEDD1Q8NHV4 660 aa17.72■□□□□ 0.43
MBD1-203ENST00000339998 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.43
MBD1-203ENST00000339998 VWA3AA6NCI4 1184 aa17.71■□□□□ 0.43
MBD1-203ENST00000339998 ZNF75DP51815 510 aa17.71■□□□□ 0.43
MBD1-203ENST00000339998 LRMPQ12912 555 aa17.71■□□□□ 0.43
MBD1-203ENST00000339998 PTGDRQ13258 359 aa17.71■□□□□ 0.43
MBD1-203ENST00000339998 ARID5BQ14865 1188 aa17.71■□□□□ 0.43
MBD1-203ENST00000339998 KRBA2Q6ZNG9 492 aa17.71■□□□□ 0.43
MBD1-203ENST00000339998 PCDHA5Q9Y5H7 936 aa17.71■□□□□ 0.43
MBD1-203ENST00000339998 RAD21O60216 631 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 ZRSR1Q15695 479 aaKnown RBP17.7■□□□□ 0.42
MBD1-203ENST00000339998 TMED8Q6PL24 325 aaPredicted RBP17.7■□□□□ 0.42
MBD1-203ENST00000339998 TEKT1Q969V4 418 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 MPHOSPH10O00566 681 aaKnown RBP17.7■□□□□ 0.42
MBD1-203ENST00000339998 TTC38Q5R3I4 469 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 CCDC186Q7Z3E2 898 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 CEP57L1Q8IYX8 460 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 ANKS1AQ92625 1134 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 STK32BQ9NY57 414 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 PALM3A6NDB9 673 aaPredicted RBP17.7■□□□□ 0.42
MBD1-203ENST00000339998 BMP6P22004 513 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 RGS22Q8NE09 1264 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 CLIP2Q9UDT6 1046 aa17.7■□□□□ 0.42
MBD1-203ENST00000339998 SRPRBQ9Y5M8 271 aaKnown RBP17.7■□□□□ 0.42
MBD1-203ENST00000339998 GABPAQ06546 454 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms