RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SERPINC1P01008 464 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 GUCY1A2P33402 732 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 CFAP100Q494V2 611 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 MROH7-TTC4A0A0A0MT08 1334 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 TNKSO95271 1327 aa21.38■■□□□ 1.01
PSPC1-201ENST00000338910 PPP2R3AQ06190 1150 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 TRIM29Q14134 588 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 ZNF654Q8IZM8 581 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 FMNL1O95466 1100 aaPredicted RBP21.37■■□□□ 1.01
PSPC1-201ENST00000338910 TOP1P11387 765 aaKnown RBP21.37■■□□□ 1.01
PSPC1-201ENST00000338910 IFNAR1P17181 557 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 CASQ1P31415 396 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 DZIP1Q86YF9 867 aaKnown RBP21.37■■□□□ 1.01
PSPC1-201ENST00000338910 NLGN1Q8N2Q7 840 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 FANCBQ8NB91 859 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 RABGGTAQ92696 567 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 PARD6BQ9BYG5 372 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 PSD3Q9NYI0 1048 aa21.37■■□□□ 1.01
PSPC1-201ENST00000338910 TMEM232C9JQI7 657 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 BBOX1O75936 387 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 UFL1O94874 794 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 HOXA10P31260 410 aaPredicted RBP21.36■■□□□ 1.01
PSPC1-201ENST00000338910 ANO1Q5XXA6 986 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 FAM177A1Q8N128 213 aaPredicted RBP21.36■■□□□ 1.01
PSPC1-201ENST00000338910 MTA3Q9BTC8 594 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 CRNKL1Q9BZJ0 848 aaKnown RBP21.36■■□□□ 1.01
PSPC1-201ENST00000338910 DCP1AQ9NPI6 582 aaPredicted RBP21.36■■□□□ 1.01
PSPC1-201ENST00000338910 BAZ2AQ9UIF9 1905 aaKnown RBP21.36■■□□□ 1.01
PSPC1-201ENST00000338910 KLRG2A4D1S0 409 aaPredicted RBP21.36■■□□□ 1.01
PSPC1-201ENST00000338910 GOLGA6L9A6NEM1 432 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 GNG11P61952 73 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 SEC23AQ15436 765 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 EXOC4Q96A65 974 aa21.36■■□□□ 1.01
PSPC1-201ENST00000338910 SLC4A8Q2Y0W8 1093 aa21.35■■□□□ 1.01
PSPC1-201ENST00000338910 ENAHQ8N8S7 591 aaPredicted RBP21.35■■□□□ 1.01
PSPC1-201ENST00000338910 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
PSPC1-201ENST00000338910 ZSCAN10Q96SZ4 725 aaPredicted RBP21.35■■□□□ 1.01
PSPC1-201ENST00000338910 MYO1BO43795 1136 aa21.35■■□□□ 1.01
PSPC1-201ENST00000338910 WDHD1O75717 1129 aaPredicted RBP21.35■■□□□ 1.01
PSPC1-201ENST00000338910 ZNF804AQ7Z570 1209 aa21.35■■□□□ 1.01
PSPC1-201ENST00000338910 TRIM22Q8IYM9 498 aa21.35■■□□□ 1.01
PSPC1-201ENST00000338910 INTS13Q9NVM9 706 aa21.35■■□□□ 1.01
PSPC1-201ENST00000338910 ADAM21Q9UKJ8 722 aa21.35■■□□□ 1.01
PSPC1-201ENST00000338910 CYP2D6P10635 497 aa21.34■■□□□ 1.01
PSPC1-201ENST00000338910 SPTY2D1Q68D10 685 aaPredicted RBP21.34■■□□□ 1.01
PSPC1-201ENST00000338910 GOLGA5Q8TBA6 731 aa21.34■■□□□ 1.01
PSPC1-201ENST00000338910 RASSF4Q9H2L5 321 aa21.34■■□□□ 1.01
PSPC1-201ENST00000338910 GGA1Q9UJY5 639 aa21.34■■□□□ 1.01
PSPC1-201ENST00000338910 CCDC196A0A1B0GTZ2 297 aa21.34■■□□□ 1.01
PSPC1-201ENST00000338910 MARCKSP29966 332 aaPredicted RBP21.34■■□□□ 1.01
PSPC1-201ENST00000338910 TBX2Q13207 712 aaPredicted RBP21.34■■□□□ 1.01
PSPC1-201ENST00000338910 CRACR2BQ8N4Y2 399 aaPredicted RBP21.34■■□□□ 1.01
PSPC1-201ENST00000338910 CRAMP1Q96RY5 1269 aa21.34■■□□□ 1.01
PSPC1-201ENST00000338910 MYO1CO00159 1063 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 LDHBP07195 334 aaKnown RBP21.33■■□□□ 1.01
PSPC1-201ENST00000338910 SYKP43405 635 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 GRIK5Q16478 980 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 PTPN21Q16825 1174 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 RGS22Q8NE09 1264 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 POLLQ9UGP5 575 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 KCNJ14Q9UNX9 436 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 HPSEQ9Y251 543 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 STK36Q9NRP7 1315 aa21.33■■□□□ 1.01
PSPC1-201ENST00000338910 H3BQF6 201 aa21.33■■□□□ 1
PSPC1-201ENST00000338910 ATP2B4P23634 1241 aa21.33■■□□□ 1
PSPC1-201ENST00000338910 GYS2P54840 703 aa21.33■■□□□ 1
PSPC1-201ENST00000338910 IFIT1BQ5T764 474 aaKnown RBP21.33■■□□□ 1
PSPC1-201ENST00000338910 IQCA1Q86XH1 822 aa21.33■■□□□ 1
PSPC1-201ENST00000338910 WDR66Q8TBY9 1149 aa21.33■■□□□ 1
PSPC1-201ENST00000338910 WASF1Q92558 559 aa21.33■■□□□ 1
PSPC1-201ENST00000338910 BAG1Q99933 345 aaPredicted RBP21.33■■□□□ 1
PSPC1-201ENST00000338910 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.33■■□□□ 1
PSPC1-201ENST00000338910 ATP8A2Q9NTI2 1148 aa21.33■■□□□ 1
PSPC1-201ENST00000338910 CWC15Q9P013 229 aaKnown RBP21.33■■□□□ 1
PSPC1-201ENST00000338910 LCMT1Q9UIC8 334 aa21.33■■□□□ 1
PSPC1-201ENST00000338910 CCDC151A5D8V7 595 aa21.32■■□□□ 1
PSPC1-201ENST00000338910 MAP2K7O14733 419 aa21.32■■□□□ 1
PSPC1-201ENST00000338910 SLC39A14Q15043 492 aa21.32■■□□□ 1
PSPC1-201ENST00000338910 LONRF2Q1L5Z9 754 aa21.32■■□□□ 1
PSPC1-201ENST00000338910 JAKMIP3Q5VZ66 844 aa21.32■■□□□ 1
PSPC1-201ENST00000338910 C15orf52Q6ZUT6 534 aaKnown RBP21.32■■□□□ 1
PSPC1-201ENST00000338910 GOLGA1Q92805 767 aa21.32■■□□□ 1
PSPC1-201ENST00000338910 FANCLQ9NW38 375 aa21.32■■□□□ 1
PSPC1-201ENST00000338910 RGS17Q9UGC6 210 aaPredicted RBP21.32■■□□□ 1
PSPC1-201ENST00000338910 STX10O60499 249 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 MMP10P09238 476 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 FGRP09769 529 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 TXLNAP40222 546 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 DIXDC1Q155Q3 683 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 FAM47AQ5JRC9 791 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 MSL1Q68DK7 614 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 PLCD3Q8N3E9 789 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 IQUBQ8NA54 791 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 CD209Q9NNX6 404 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 MCM9Q9NXL9 1143 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 NID2Q14112 1375 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 BTBD18B2RXH4 712 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 NMT2O60551 498 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 TBC1D16Q8TBP0 767 aa21.31■■□□□ 1
PSPC1-201ENST00000338910 MYH2Q9UKX2 1941 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms