RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FUT2Q10981 343 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 RASGRP2Q7LDG7 609 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 FERMT3Q86UX7 667 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 APOBEC3FQ8IUX4 373 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 STAG2Q8N3U4 1231 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 SRBD1Q8N5C6 995 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 C8orf76Q96K31 380 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 ALG1Q9BT22 464 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 KANSL2Q9H9L4 492 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 ADARB2Q9NS39 739 aaKnown RBP17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GGA3Q9NZ52 723 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
CDK5RAP3-201ENST00000338399 TCHHQ07283 1943 aa17.13■□□□□ 0.33
CDK5RAP3-201ENST00000338399 BAZ2BQ9UIF8 2168 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
CDK5RAP3-201ENST00000338399 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GJB4Q9NTQ9 266 aa17.13■□□□□ 0.33
CDK5RAP3-201ENST00000338399 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 MAP3K10Q02779 954 aa17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 CNTNAP5Q8WYK1 1306 aa17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 DEXIO95424 95 aa17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GOLGA8HP0CJ92 632 aa17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 ICA1Q05084 483 aa17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 NBPF12Q5TAG4 269 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 WASF1Q92558 559 aa17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 NYAP2Q9P242 653 aa17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 V9GY48 417 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-201ENST00000338399 ZC3H4Q9UPT8 1303 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 hCG_1642624A0A1W2PR95 340 aa17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PALM3A6NDB9 673 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 USP17L5A8MUK1 530 aa17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PRPF3O43395 683 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PARP1P09874 1014 aaKnown RBP17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GNAQP50148 359 aa17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 FBXO18Q8NFZ0 1043 aa17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-201ENST00000338399 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PDHBP11177 359 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PRAMEF18Q5VWM3 479 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 MKL1Q969V6 931 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 ATP6V1DQ9Y5K8 247 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 ATAD5Q96QE3 1844 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 CAP2P40123 477 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PHF20L1A8MW92 1017 aa17.09■□□□□ 0.33
CDK5RAP3-201ENST00000338399 RESTQ13127 1097 aa17.09■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PKN1Q16512 942 aa17.09■□□□□ 0.33
CDK5RAP3-201ENST00000338399 KRT40Q6A162 431 aa17.09■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PIBF1Q8WXW3 757 aa17.09■□□□□ 0.33
CDK5RAP3-201ENST00000338399 FRMPD2Q68DX3 1309 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 RAD21O60216 631 aa17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 SNHG28P0DPA3 235 aa17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 TRIM29Q14134 588 aa17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 FAM173BQ6P4H8 233 aa17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 LZTS2Q9BRK4 669 aa17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 CPVLQ9H3G5 476 aa17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 ZSCAN16Q9H4T2 348 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP3-201ENST00000338399 PITPNM2Q9BZ72 1349 aa17.08■□□□□ 0.32
CDK5RAP3-201ENST00000338399 PPP2R3BQ9Y5P8 575 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 MYH15Q9Y2K3 1946 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 DDX11L8A8MPP1 907 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GOLGA6L22H0YM25 854 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 CYTH3O43739 400 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 EPHX2P34913 555 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ASPRV1Q53RT3 343 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 DCAF15Q66K64 600 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 DCPSQ96C86 337 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 GPCPD1Q9NPB8 672 aa17.07■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SCN4AP35499 1836 aa17.06■□□□□ 0.32
CDK5RAP3-201ENST00000338399 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ZNF543Q08ER8 600 aa17.06■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SLFN13Q68D06 897 aa17.06■□□□□ 0.32
CDK5RAP3-201ENST00000338399 USP50Q70EL3 339 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-201ENST00000338399 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
CDK5RAP3-201ENST00000338399 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
CDK5RAP3-201ENST00000338399 CNPY2Q9Y2B0 182 aa17.06■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ASNSP08243 561 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 NCLP19338 710 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 CCDC96Q2M329 555 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 KCTD1Q719H9 257 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SPZ1Q9BXG8 430 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ZNF341Q9BYN7 854 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 ARHGEF10LQ9HCE6 1279 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 VPS54Q9P1Q0 977 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 RBM27Q9P2N5 1060 aaKnown RBP17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 F5H6K3 240 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 SCG2P13521 617 aa17.05■□□□□ 0.32
CDK5RAP3-201ENST00000338399 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms