RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 FUCA2Q9BTY2 467 aa16.45■□□□□ 0.22
FGFR1-202ENST00000335922 MMRN2Q9H8L6 949 aa16.45■□□□□ 0.22
FGFR1-202ENST00000335922 ATP2C2O75185 946 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 RILPL1Q5EBL4 403 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 LINC00116Q8NCU8 138 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 CCDC113Q9H0I3 377 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 SYNRGQ9UMZ2 1314 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 KIF28PB7ZC32 967 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 KRT2P35908 639 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 TMEM266Q2M3C6 531 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 NOSTRINQ8IVI9 506 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 ADGRB2O60241 1585 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 KIAA1210Q9ULL0 1709 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 ANKRD65E5RJM6 399 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 BTDP43251 543 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 DYNLL1P63167 89 aaKnown RBP16.44■□□□□ 0.22
FGFR1-202ENST00000335922 SP4Q02446 784 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 CCDC122Q5T0U0 273 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 FMR1NBQ8N0W7 255 aaPredicted RBP16.44■□□□□ 0.22
FGFR1-202ENST00000335922 TXLNBQ8N3L3 684 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
FGFR1-202ENST00000335922 ASIC1P78348 528 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 IRX2Q9BZI1 471 aaPredicted RBP16.43■□□□□ 0.22
FGFR1-202ENST00000335922 ZMYND10O75800 440 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 GRAPQ13588 217 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 MAP9Q49MG5 647 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 ARMCX5Q6P1M9 558 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
FGFR1-202ENST00000335922 DDX41Q9UJV9 622 aaKnown RBP16.43■□□□□ 0.22
FGFR1-202ENST00000335922 LEMD3Q9Y2U8 911 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 CHRNA5P30532 468 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 HLTFQ14527 1009 aaKnown RBP eCLIP16.43■□□□□ 0.22
FGFR1-202ENST00000335922 FCHSD1Q86WN1 690 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 TMEM87BQ96K49 555 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 RAB34Q9BZG1 259 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 TCP11L1Q9NUJ3 509 aa16.43■□□□□ 0.22
FGFR1-202ENST00000335922 DPY19L2Q6NUT2 758 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 PICK1Q9NRD5 415 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 SOWAHDA6NJG2 315 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 UBE2Q2LH0YL09 131 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 ENC1O14682 589 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 A0A1W2PQ27 194 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 A0A1W2PQ64 194 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 A0A1W2PQD8 194 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 NEFHP12036 1026 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 WWC2Q6AWC2 1192 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 LUC7LQ9NQ29 371 aaKnown RBP16.42■□□□□ 0.22
FGFR1-202ENST00000335922 ZNF609O15014 1411 aa16.42■□□□□ 0.22
FGFR1-202ENST00000335922 CIAO1O76071 339 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 RASGRF1Q13972 1273 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 POLR3EQ9NVU0 708 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
FGFR1-202ENST00000335922 CYP2D7A0A087X1C5 515 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 DEXIO95424 95 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 PARP1P09874 1014 aaKnown RBP16.41■□□□□ 0.22
FGFR1-202ENST00000335922 IQCEQ6IPM2 695 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 BARGINQ6ZT62 677 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 MLKLQ8NB16 471 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
FGFR1-202ENST00000335922 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 PRM3Q9NNZ6 103 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 PAFAH1B1P43034 410 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 SLC27A3Q5K4L6 730 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 AKNAD1Q5T1N1 836 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 CEP112Q8N8E3 955 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 IQUBQ8NA54 791 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 GIMAP7Q8NHV1 300 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 PCDHB6Q9Y5E3 794 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 NPR1P16066 1061 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 SLC1A4P43007 532 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 ZNF654Q8IZM8 581 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 CTAGE1Q96RT6 745 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 CSRNP2Q9H175 543 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 PKD2L1Q9P0L9 805 aa16.41■□□□□ 0.22
FGFR1-202ENST00000335922 CDC25BP30305 580 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 CCZ1BP86790 482 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 CCZ1P86791 482 aaPredicted RBP16.4■□□□□ 0.22
FGFR1-202ENST00000335922 E4F1Q66K89 784 aaPredicted RBP16.4■□□□□ 0.22
FGFR1-202ENST00000335922 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
FGFR1-202ENST00000335922 TAF4BQ92750 862 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 CASP14P31944 242 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 PPARAQ07869 468 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 SF3A3Q12874 501 aaKnown RBP eCLIP16.4■□□□□ 0.222e-6■■■□□ 17.2
FGFR1-202ENST00000335922 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
FGFR1-202ENST00000335922 DALRD3Q5D0E6 543 aaKnown RBP16.4■□□□□ 0.22
FGFR1-202ENST00000335922 EPSTI1Q96J88 318 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 MRPS25P82663 173 aaKnown RBP16.4■□□□□ 0.22
FGFR1-202ENST00000335922 TERF2Q15554 542 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 TBC1D10CQ8IV04 446 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 ACRBPQ8NEB7 543 aa16.4■□□□□ 0.22
FGFR1-202ENST00000335922 ZMYM6O95789 1325 aa16.39■□□□□ 0.22
FGFR1-202ENST00000335922 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
FGFR1-202ENST00000335922 CALM1P0DP23 149 aa16.39■□□□□ 0.21
FGFR1-202ENST00000335922 CALM2P0DP24 149 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms