RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 VPS16Q9H269 839 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 ABHD10Q9NUJ1 306 aa26.73■■□□□ 1.87
TSKU-201ENST00000333090 SEMA3EO15041 775 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 KRT31Q15323 416 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 SRLQ86TD4 932 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 NLRP10Q86W26 655 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 SHISA4Q96DD7 197 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 SLF1Q9BQI6 1058 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 SLC4A4Q9Y6R1 1079 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 SNAP23O00161 211 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 IRS4O14654 1257 aaPredicted RBP26.72■■□□□ 1.87
TSKU-201ENST00000333090 LCORLQ8N3X6 602 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 NACAP1Q9BZK3 213 aa26.72■■□□□ 1.87
TSKU-201ENST00000333090 RRP15Q9Y3B9 282 aaKnown RBP26.72■■□□□ 1.87
TSKU-201ENST00000333090 CDHR2Q9BYE9 1310 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 RNF225M0QZC1 329 aaPredicted RBP26.71■■□□□ 1.87
TSKU-201ENST00000333090 RASGRF1Q13972 1273 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 NCAPH2Q6IBW4 605 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 GIGYF2Q6Y7W6 1299 aaKnown RBP26.71■■□□□ 1.87
TSKU-201ENST00000333090 UBAC1Q9BSL1 405 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 ITIH6Q6UXX5 1313 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 ARHGAP25P42331 645 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 PUM3Q15397 648 aaKnown RBP26.71■■□□□ 1.87
TSKU-201ENST00000333090 TMTC2Q8N394 836 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 GBP3Q9H0R5 595 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 BLZF1Q9H2G9 400 aa26.71■■□□□ 1.87
TSKU-201ENST00000333090 WNT7AO00755 349 aa26.7■■□□□ 1.87
TSKU-201ENST00000333090 PRDM1O75626 825 aa26.7■■□□□ 1.87
TSKU-201ENST00000333090 IQUBQ8NA54 791 aa26.7■■□□□ 1.87
TSKU-201ENST00000333090 LPIN2Q92539 896 aa26.7■■□□□ 1.87
TSKU-201ENST00000333090 XBP1P17861 261 aa26.7■■□□□ 1.86
TSKU-201ENST00000333090 FECHP22830 423 aa26.7■■□□□ 1.86
TSKU-201ENST00000333090 TNNT3P45378 269 aaPredicted RBP26.7■■□□□ 1.86
TSKU-201ENST00000333090 CYP26C1Q6V0L0 522 aa26.7■■□□□ 1.86
TSKU-201ENST00000333090 CARD10Q9BWT7 1032 aa26.7■■□□□ 1.86
TSKU-201ENST00000333090 MYH8P13535 1937 aa26.69■■□□□ 1.86
TSKU-201ENST00000333090 MSL3Q8N5Y2 521 aaKnown RBP26.69■■□□□ 1.86
TSKU-201ENST00000333090 TAB2Q9NYJ8 693 aa26.69■■□□□ 1.86
TSKU-201ENST00000333090 TRMT112Q9UI30 125 aaKnown RBP26.69■■□□□ 1.86
TSKU-201ENST00000333090 MYO6Q9UM54 1294 aa26.69■■□□□ 1.86
TSKU-201ENST00000333090 A0A0G2JS52 829 aa26.69■■□□□ 1.86
TSKU-201ENST00000333090 KRT2P35908 639 aa26.69■■□□□ 1.86
TSKU-201ENST00000333090 ZNF174Q15697 407 aa26.69■■□□□ 1.86
TSKU-201ENST00000333090 MIGA1Q8NAN2 632 aa26.69■■□□□ 1.86
TSKU-201ENST00000333090 CHD4Q14839 1912 aa26.69■■□□□ 1.86
TSKU-201ENST00000333090 IVLP07476 585 aa26.68■■□□□ 1.86
TSKU-201ENST00000333090 RRAGBQ5VZM2 374 aa26.68■■□□□ 1.86
TSKU-201ENST00000333090 RNF26Q9BY78 433 aaPredicted RBP26.68■■□□□ 1.86
TSKU-201ENST00000333090 RNF216Q9NWF9 866 aaPredicted RBP26.68■■□□□ 1.86
TSKU-201ENST00000333090 RSPH14Q9UHP6 348 aa26.68■■□□□ 1.86
TSKU-201ENST00000333090 KRT9P35527 623 aa26.68■■□□□ 1.86
TSKU-201ENST00000333090 MYO1AQ9UBC5 1043 aa26.68■■□□□ 1.86
TSKU-201ENST00000333090 LRRIQ3A6PVS8 624 aaPredicted RBP26.67■■□□□ 1.86
TSKU-201ENST00000333090 NKX1-1Q15270 411 aaPredicted RBP26.67■■□□□ 1.86
TSKU-201ENST00000333090 FOXR1Q6PIV2 292 aa26.67■■□□□ 1.86
TSKU-201ENST00000333090 FERMT2Q96AC1 680 aa26.67■■□□□ 1.86
TSKU-201ENST00000333090 GUCA1BQ9UMX6 200 aa26.67■■□□□ 1.86
TSKU-201ENST00000333090 TNS2Q63HR2 1409 aa26.67■■□□□ 1.86
TSKU-201ENST00000333090 FAM71BQ8TC56 605 aa26.67■■□□□ 1.86
TSKU-201ENST00000333090 SOS2Q07890 1332 aaPredicted RBP26.67■■□□□ 1.86
TSKU-201ENST00000333090 COPB1P53618 953 aaKnown RBP26.67■■□□□ 1.86
TSKU-201ENST00000333090 NOM1Q5C9Z4 860 aaKnown RBP26.67■■□□□ 1.86
TSKU-201ENST00000333090 TRIM10Q9UDY6 481 aa26.67■■□□□ 1.86
TSKU-201ENST00000333090 LIMA1Q9UHB6 759 aaKnown RBP26.67■■□□□ 1.86
TSKU-201ENST00000333090 AMPD2Q01433 879 aa26.66■■□□□ 1.86
TSKU-201ENST00000333090 BTG4Q9NY30 223 aa26.66■■□□□ 1.86
TSKU-201ENST00000333090 TNKSO95271 1327 aa26.66■■□□□ 1.86
TSKU-201ENST00000333090 MINDY4BA8MYZ0 360 aa26.66■■□□□ 1.86
TSKU-201ENST00000333090 PKN1Q16512 942 aa26.66■■□□□ 1.86
TSKU-201ENST00000333090 CHP1Q99653 195 aa26.66■■□□□ 1.86
TSKU-201ENST00000333090 RNF41Q9H4P4 317 aaPredicted RBP26.66■■□□□ 1.86
TSKU-201ENST00000333090 XDHP47989 1333 aa26.65■■□□□ 1.86
TSKU-201ENST00000333090 PHF20Q9BVI0 1012 aa26.65■■□□□ 1.86
TSKU-201ENST00000333090 TUBBP07437 444 aa26.65■■□□□ 1.86
TSKU-201ENST00000333090 FGFR2P21802 821 aa26.65■■□□□ 1.86
TSKU-201ENST00000333090 ANKRD20A12PQ8NF67 263 aa26.65■■□□□ 1.86
TSKU-201ENST00000333090 SLC4A9Q96Q91 983 aa26.65■■□□□ 1.86
TSKU-201ENST00000333090 V9GY48 417 aaPredicted RBP26.65■■□□□ 1.86
TSKU-201ENST00000333090 ENC1O14682 589 aa26.64■■□□□ 1.86
TSKU-201ENST00000333090 SLC5A1P13866 664 aa26.64■■□□□ 1.86
TSKU-201ENST00000333090 GNAT2P19087 354 aa26.64■■□□□ 1.86
TSKU-201ENST00000333090 RCAN1P53805 252 aa26.64■■□□□ 1.86
TSKU-201ENST00000333090 CCDC148Q8NFR7 591 aa26.64■■□□□ 1.86
TSKU-201ENST00000333090 ACBD3Q9H3P7 528 aa26.64■■□□□ 1.86
TSKU-201ENST00000333090 LRRC10BA6NIK2 292 aa26.64■■□□□ 1.85
TSKU-201ENST00000333090 PPARAQ07869 468 aa26.64■■□□□ 1.85
TSKU-201ENST00000333090 PAK1Q13153 545 aa26.64■■□□□ 1.85
TSKU-201ENST00000333090 PTGDRQ13258 359 aa26.64■■□□□ 1.85
TSKU-201ENST00000333090 FAM204AQ9H8W3 233 aa26.64■■□□□ 1.85
TSKU-201ENST00000333090 MAPK8IP1Q9UQF2 711 aa26.64■■□□□ 1.85
TSKU-201ENST00000333090 KCNJ18B7U540 433 aa26.63■■□□□ 1.85
TSKU-201ENST00000333090 KCNJ12Q14500 433 aa26.63■■□□□ 1.85
TSKU-201ENST00000333090 TCP11X2Q5H9J9 407 aa26.63■■□□□ 1.85
TSKU-201ENST00000333090 XIRP1Q702N8 1843 aaKnown RBP26.63■■□□□ 1.85
TSKU-201ENST00000333090 STARD3NLO95772 234 aa26.63■■□□□ 1.85
TSKU-201ENST00000333090 BMP15O95972 392 aa26.63■■□□□ 1.85
TSKU-201ENST00000333090 UBXN1Q04323 297 aa26.63■■□□□ 1.85
TSKU-201ENST00000333090 SPAG1Q07617 926 aa26.63■■□□□ 1.85
TSKU-201ENST00000333090 HDAC6Q9UBN7 1215 aa26.63■■□□□ 1.85
TSKU-201ENST00000333090 RWDD2AQ9UIY3 292 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms