RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 MYCBPAPQ8TBZ2 947 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 SAAL1Q96ER3 474 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 CCDC114Q96M63 670 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 RNF14Q9UBS8 474 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 SAMM50Q9Y512 469 aa9.4□□□□□ -0.91
SKA2-201ENST00000330137 PARP4Q9UKK3 1724 aaKnown RBP9.39□□□□□ -0.91
SKA2-201ENST00000330137 C5orf60A6NFR6 353 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 MDH1P40925 334 aaKnown RBP9.39□□□□□ -0.91
SKA2-201ENST00000330137 ERVK-24P63145 666 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 KIAA0753Q2KHM9 967 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 KSR2Q6VAB6 950 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 LINS1Q8NG48 757 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 JAKMIP2Q96AA8 810 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
SKA2-201ENST00000330137 CCT8L2Q96SF2 557 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 SEC62Q99442 399 aaKnown RBP9.39□□□□□ -0.91
SKA2-201ENST00000330137 DBF4Q9UBU7 674 aaPredicted RBP9.39□□□□□ -0.91
SKA2-201ENST00000330137 USP6P35125 1406 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 TTC36A6NLP5 189 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 GSTA1P08263 222 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 PECAM1P16284 738 aaPredicted RBP9.39□□□□□ -0.91
SKA2-201ENST00000330137 GBP2P32456 591 aaPredicted RBP9.39□□□□□ -0.91
SKA2-201ENST00000330137 CCDC38Q502W7 563 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 TTMPQ5BVD1 217 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 CCDC170Q8IYT3 715 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 IQCDQ96DY2 449 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 CCDC8Q9H0W5 538 aaPredicted RBP9.39□□□□□ -0.91
SKA2-201ENST00000330137 COPRSQ9NQ92 184 aa9.39□□□□□ -0.91
SKA2-201ENST00000330137 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 GRM8O00222 908 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 SH2B2O14492 632 aaPredicted RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 SNUPNO95149 360 aaKnown RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 IPO7O95373 1038 aaKnown RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 EIF4A1P60842 406 aaKnown RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 SEMA3FQ13275 785 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 CUL4BQ13620 913 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 SND1Q7KZF4 910 aaKnown RBP eCLIP9.38□□□□□ -0.91
SKA2-201ENST00000330137 IQCKQ8N0W5 287 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 ACRBPQ8NEB7 543 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 GSDMAQ96QA5 445 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 NCOA5Q9HCD5 579 aaKnown RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 SAMSN1Q9NSI8 373 aaKnown RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 ZNHIT6Q9NWK9 470 aaKnown RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 MST1RQ04912 1400 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 A0A1W2PQC6 194 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 KIF28PB7ZC32 967 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 CPLX1O14810 134 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 TEX33O43247 280 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 PTPREP23469 700 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 RNF187Q5TA31 235 aaPredicted RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 SLC9C2Q5TAH2 1124 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 LRIG3Q6UXM1 1119 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 IL17REQ8NFR9 667 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 OR8K1Q8NGG5 319 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 OSBPL9Q96SU4 736 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 DNAJC7Q99615 494 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 CPSF2Q9P2I0 782 aaKnown RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 FBXO3Q9UK99 471 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 CORO1CQ9ULV4 474 aaPredicted RBP9.38□□□□□ -0.91
SKA2-201ENST00000330137 CEP131Q9UPN4 1083 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 SYNRGQ9UMZ2 1314 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 ROBO1Q9Y6N7 1651 aa9.38□□□□□ -0.91
SKA2-201ENST00000330137 ERICH2A1L162 156 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 PAEPP09466 180 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 NR1D1P20393 614 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 MARCKSP29966 332 aaPredicted RBP9.37□□□□□ -0.91
SKA2-201ENST00000330137 FXR1P51114 621 aaKnown RBP eCLIP9.37□□□□□ -0.91
SKA2-201ENST00000330137 CCNHP51946 323 aaPredicted RBP9.37□□□□□ -0.91
SKA2-201ENST00000330137 VAV2P52735 878 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 CDK17Q00537 523 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 ANKRD20A8PQ5CZ79 823 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 SPECC1Q5M775 1068 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 ZMYM1Q5SVZ6 1142 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 FAM228AQ86W67 206 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 VPS37DQ86XT2 251 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 TPX2Q9ULW0 747 aaKnown RBP9.37□□□□□ -0.91
SKA2-201ENST00000330137 PA2G4Q9UQ80 394 aaKnown RBP9.37□□□□□ -0.91
SKA2-201ENST00000330137 ABLIM1O14639 778 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 AHCYL1O43865 530 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 MYBL2P10244 700 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 TCP1P17987 556 aaKnown RBP9.37□□□□□ -0.91
SKA2-201ENST00000330137 GCKP35557 465 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 CYLC1P35663 651 aaPredicted RBP9.37□□□□□ -0.91
SKA2-201ENST00000330137 PDCLQ13371 301 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 MEA1Q16626 185 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 CEP57Q86XR8 500 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 RETREG2Q8NC44 543 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 TRIM58Q8NG06 486 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 CAGE1Q8TC20 777 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 MED15Q96RN5 788 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 PYM1Q9BRP8 204 aaKnown RBP9.37□□□□□ -0.91
SKA2-201ENST00000330137 LRRC2Q9BYS8 371 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 STIM2Q9P246 746 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 HPS5Q9UPZ3 1129 aa9.37□□□□□ -0.91
SKA2-201ENST00000330137 CFAP73A6NFT4 308 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 IRF6O14896 467 aa9.36□□□□□ -0.91
SKA2-201ENST00000330137 LUC7L3O95232 432 aaKnown RBP9.36□□□□□ -0.91
SKA2-201ENST00000330137 ATP1A1P05023 1023 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms