RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 TRIM42Q8IWZ5 723 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 RPUSD2Q8IZ73 545 aaKnown RBP13.93□□□□□ -0.18
FN1-201ENST00000323926 CDHR1Q96JP9 859 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 NSFL1CQ9UNZ2 370 aaKnown RBP13.93□□□□□ -0.18
FN1-201ENST00000323926 LMTK3Q96Q04 1460 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 SNRKQ9NRH2 765 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 PPFIA4O75335 1185 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 PICALMQ13492 652 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 BRD3Q15059 726 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 SECISBP2LQ93073 1101 aaKnown RBP13.93□□□□□ -0.18
FN1-201ENST00000323926 EPS15L1Q9UBC2 864 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 TCIRG1Q13488 830 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 PPP2R5AQ15172 486 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 ATP8A2Q9NTI2 1148 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 MED23Q9ULK4 1368 aa13.93□□□□□ -0.18
FN1-201ENST00000323926 SEPT2Q15019 361 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.92□□□□□ -0.18
FN1-201ENST00000323926 LUC7L3O95232 432 aaKnown RBP13.92□□□□□ -0.18
FN1-201ENST00000323926 RBM6P78332 1123 aaKnown RBP13.92□□□□□ -0.18
FN1-201ENST00000323926 PODNQ7Z5L7 613 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 KCNK9Q9NPC2 374 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 ZNF274Q96GC6 653 aaPredicted RBP13.92□□□□□ -0.18
FN1-201ENST00000323926 DNAJC25Q9H1X3 360 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 SFMBT2Q5VUG0 894 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 RETREG2Q8NC44 543 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 SATB1Q01826 763 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 ARID5AQ03989 594 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 RAPGEF1Q13905 1077 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 PSMD1Q99460 953 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 CCDC186Q7Z3E2 898 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 RBSNQ9H1K0 784 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 KRT3P12035 628 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 IBSPP21815 317 aaPredicted RBP13.92□□□□□ -0.18
FN1-201ENST00000323926 ASPHQ12797 758 aa13.92□□□□□ -0.18
FN1-201ENST00000323926 STAT1P42224 750 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 ZNF445P59923 1031 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 STK32BQ9NY57 414 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 UBAP1LF5GYI3 381 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 ALCAMQ13740 583 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 TTC38Q5R3I4 469 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 CEP85LQ5SZL2 805 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 SRRM1Q8IYB3 904 aaKnown RBP13.91□□□□□ -0.18
FN1-201ENST00000323926 USP26Q9BXU7 913 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 CCDC87Q9NVE4 849 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 PDE4DQ08499 809 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 CCDC25Q86WR0 208 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 ADPGKQ9BRR6 497 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 DRC3Q9H069 523 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 POLR2DO15514 142 aaKnown RBP13.91□□□□□ -0.18
FN1-201ENST00000323926 SRGAP2BP0DMP2 458 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 HSPA1LP34931 641 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 RINT1Q6NUQ1 792 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 RNF34Q969K3 372 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 KDRP35968 1356 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 A0A1B0GUL7 405 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 ZNF202O95125 648 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 NONOQ15233 471 aaKnown RBP eCLIP13.91□□□□□ -0.18
FN1-201ENST00000323926 ZBTB8OSQ8IWT0 167 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 VAMP4O75379 141 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 KPNA2P52292 529 aaKnown RBP13.91□□□□□ -0.18
FN1-201ENST00000323926 NLRP12P59046 1061 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 ZNF449Q6P9G9 518 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 PEX26Q7Z412 305 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 RPAP1Q9BWH6 1393 aaPredicted RBP13.91□□□□□ -0.18
FN1-201ENST00000323926 MGEA5O60502 916 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 GCP02774 474 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 TROVE2P10155 538 aaKnown RBP eCLIP13.91□□□□□ -0.18
FN1-201ENST00000323926 KRT9P35527 623 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 DEUP1Q05D60 604 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 MIPOL1Q8TD10 442 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 CCDC124Q96CT7 223 aaKnown RBP13.91□□□□□ -0.18
FN1-201ENST00000323926 WWC3Q9ULE0 1092 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 NCAPD2Q15021 1401 aa13.91□□□□□ -0.18
FN1-201ENST00000323926 AFDNP55196 1824 aaKnown RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 HADHQ16836 314 aaKnown RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 IFT81Q8WYA0 676 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 RSPH14Q9UHP6 348 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 AMFRQ9UKV5 643 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 RPS6KA1Q15418 735 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 NIM1KQ8IY84 436 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 LARSQ9P2J5 1176 aaKnown RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 FOSP01100 380 aaPredicted RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 GKAP1Q5VSY0 366 aaPredicted RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 POLKQ9UBT6 870 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 TNNI3KQ59H18 835 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 SDCCAG3Q96C92 435 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 PANK2Q9BZ23 570 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 RASSF4Q9H2L5 321 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 MRPL11Q9Y3B7 192 aaKnown RBP13.9□□□□□ -0.18
FN1-201ENST00000323926 FPGT-TNNI3KV9GXZ4 949 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 ZEB2O60315 1214 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.181e-323■□□□□ 9.4
FN1-201ENST00000323926 VPS18Q9P253 973 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 SAMD9LQ8IVG5 1584 aa13.9□□□□□ -0.18
FN1-201ENST00000323926 RNF40O75150 1001 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms