RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 VCAM1P19320 739 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 PTPREP23469 700 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 RRP1P56182 461 aaKnown RBP10.12□□□□□ -0.79
MSL3-201ENST00000312196 MAP2K5Q13163 448 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 COG2Q14746 738 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 C20orf194Q5TEA3 1177 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 CCDC84Q86UT8 332 aaPredicted RBP10.12□□□□□ -0.79
MSL3-201ENST00000312196 PAWRQ96IZ0 340 aaKnown RBP10.12□□□□□ -0.79
MSL3-201ENST00000312196 BOLA2Q9H3K6 86 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 MROH8Q9H579 483 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 KANSL2Q9H9L4 492 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 NYAP2Q9P242 653 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 STXBP5LQ9Y2K9 1186 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 KIAA0100Q14667 2235 aaKnown RBP10.12□□□□□ -0.79
MSL3-201ENST00000312196 ZKSCAN1P17029 563 aaPredicted RBP10.12□□□□□ -0.79
MSL3-201ENST00000312196 DSG3P32926 999 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 GRB14Q14449 540 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 VCPKMTQ9H867 229 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 ARMT1Q9H993 441 aa10.12□□□□□ -0.79
MSL3-201ENST00000312196 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.12□□□□□ -0.79
MSL3-201ENST00000312196 IGKV6D-41A0A0C4DH26 115 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 APBB1O00213 710 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 SLC25A27O95847 323 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 FDX1P10109 184 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 CDK8P49336 464 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 C1orf53Q5VUE5 145 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 MFSD14CQ5VZR4 134 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 GPR142Q7Z601 462 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 MKL1Q969V6 931 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 FEZ1Q99689 392 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 DIS3Q9Y2L1 958 aaKnown RBP10.11□□□□□ -0.79
MSL3-201ENST00000312196 SPDYE16A6NNV3 312 aaPredicted RBP10.11□□□□□ -0.79
MSL3-201ENST00000312196 SEPT2Q15019 361 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 ALX1Q15699 326 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 CTR9Q6PD62 1173 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 POTEEQ6S8J3 1075 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 SIAH1Q8IUQ4 282 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 TANGO6Q9C0B7 1094 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 TXNRD2Q9NNW7 524 aa10.11□□□□□ -0.79
MSL3-201ENST00000312196 FRMPD3Q5JV73 1810 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 PATL2C9JE40 543 aaKnown RBP10.1□□□□□ -0.79
MSL3-201ENST00000312196 ATP2A1O14983 1001 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 LHX8Q68G74 356 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 TDHQ8IZJ6 230 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 MSL3Q8N5Y2 521 aaKnown RBP10.1□□□□□ -0.79
MSL3-201ENST00000312196 PI4K2BQ8TCG2 481 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 ACER1Q8TDN7 264 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 TRIB2Q92519 343 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 RPAP3Q9H6T3 665 aaPredicted RBP10.1□□□□□ -0.79
MSL3-201ENST00000312196 SLC5A4Q9NY91 659 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 NDUFB9Q9Y6M9 179 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 SLC4A4Q9Y6R1 1079 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 ALPK3Q96L96 1907 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 ZMYM6O95789 1325 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 GSG1L2A8MUP6 293 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 PLA2G6O60733 806 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 ZMYM1Q5SVZ6 1142 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 MAF1Q9H063 256 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
MSL3-201ENST00000312196 TMEM265A0A087WTH1 108 aa10.09□□□□□ -0.79
MSL3-201ENST00000312196 USP17L12C9JPN9 530 aa10.09□□□□□ -0.79
MSL3-201ENST00000312196 USP17L21D6R901 530 aa10.09□□□□□ -0.79
MSL3-201ENST00000312196 NOVP48745 357 aa10.09□□□□□ -0.79
MSL3-201ENST00000312196 Q3C1V9 767 aa10.09□□□□□ -0.79
MSL3-201ENST00000312196 ANAPC4Q9UJX5 808 aa10.09□□□□□ -0.79
MSL3-201ENST00000312196 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
MSL3-201ENST00000312196 A0A1W2PRG0 241 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 DNM1LO00429 736 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 PRKAR2AP13861 404 aaKnown RBP10.08□□□□□ -0.8
MSL3-201ENST00000312196 ICA1Q05084 483 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 CACNB2Q08289 660 aaPredicted RBP10.08□□□□□ -0.8
MSL3-201ENST00000312196 SNX17Q15036 470 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 RAB3GAP1Q15042 981 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 RIOX2Q8IUF8 465 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 GMCL1P1Q8NEA9 526 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 SDR42E1Q8WUS8 393 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 EDC3Q96F86 508 aaKnown RBP10.08□□□□□ -0.8
MSL3-201ENST00000312196 NACAP1Q9BZK3 213 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 PUS7LQ9H0K6 701 aaKnown RBP10.08□□□□□ -0.8
MSL3-201ENST00000312196 BAZ2AQ9UIF9 1905 aaKnown RBP10.08□□□□□ -0.8
MSL3-201ENST00000312196 PRKAB2O43741 272 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 SLC3A2P08195 630 aaKnown RBP10.08□□□□□ -0.8
MSL3-201ENST00000312196 FGRP09769 529 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 CYP2D6P10635 497 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 PCP11498 1178 aaKnown RBP10.08□□□□□ -0.8
MSL3-201ENST00000312196 AKR1B1P15121 316 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 OAZ1P54368 228 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 SHROOM1Q2M3G4 852 aaPredicted RBP10.08□□□□□ -0.8
MSL3-201ENST00000312196 HELLSQ9NRZ9 838 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 BTBD7Q9P203 1132 aa10.08□□□□□ -0.8
MSL3-201ENST00000312196 RASA1P20936 1047 aa10.07□□□□□ -0.8
MSL3-201ENST00000312196 RCSD1Q6JBY9 416 aa10.07□□□□□ -0.8
MSL3-201ENST00000312196 ARRDC4Q8NCT1 418 aa10.07□□□□□ -0.8
MSL3-201ENST00000312196 REPS2Q8NFH8 660 aa10.07□□□□□ -0.8
MSL3-201ENST00000312196 OSBP2Q969R2 916 aa10.07□□□□□ -0.8
MSL3-201ENST00000312196 EVI5LQ96CN4 794 aa10.07□□□□□ -0.8
MSL3-201ENST00000312196 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.07□□□□□ -0.8
MSL3-201ENST00000312196 SPATC1LQ9H0A9 340 aa10.07□□□□□ -0.8
MSL3-201ENST00000312196 DDX20Q9UHI6 824 aaKnown RBP10.07□□□□□ -0.8
MSL3-201ENST00000312196 PFASO15067 1338 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms