RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 XKR9Q5GH70 373 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 SESTD1Q86VW0 696 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 DDX25Q9UHL0 483 aaKnown RBP11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 KIF2AO00139 706 aaPredicted RBP11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 GRIN3BO60391 1043 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 MCM3P25205 808 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 HERC4Q5GLZ8 1057 aaPredicted RBP11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 TEKT3Q9BXF9 490 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 ZHX1Q9UKY1 873 aaPredicted RBP11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 DIP2CQ9Y2E4 1556 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 CPSF1Q10570 1443 aaKnown RBP11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 CABP7Q86V35 215 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 ZNF341Q9BYN7 854 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 RTEL1Q9NZ71 1219 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 IQCA1LA6NCM1 817 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 GPKOWQ92917 476 aaPredicted RBP eCLIP11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 DHX36Q9H2U1 1008 aaKnown RBP11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 AGTPBP1Q9UPW5 1226 aa11.96□□□□□ -0.49
SYNPO2-201ENST00000307142 FSD2A1L4K1 749 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 CAVIN2O95810 425 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 ANO1Q5XXA6 986 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 EEPD1Q7L9B9 569 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 DNAJC25Q9H1X3 360 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 ABCA6Q8N139 1617 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 CCND2P30279 289 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 MAP2K1Q02750 393 aaPredicted RBP11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 MCTP2Q6DN12 878 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 PLA2G4DQ86XP0 818 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 APOBEC3FQ8IUX4 373 aaKnown RBP11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 SERPINB13Q9UIV8 391 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 CD2APQ9Y5K6 639 aa11.96□□□□□ -0.5
SYNPO2-201ENST00000307142 GAS8O95995 478 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 CRKP46108 304 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 YARSP54577 528 aaKnown RBP11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 UBXN2AP68543 259 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 SLFN12Q8IYM2 578 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 SSH3Q8TE77 659 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 ADPGKQ9BRR6 497 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 TNKSO95271 1327 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 TNNI1P19237 187 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 SNX16P57768 344 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 MECOMQ03112 1051 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 PCDHA1Q9Y5I3 950 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 TRPM1Q7Z4N2 1603 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 KRT26Q7Z3Y9 468 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 ZC3H13Q5T200 1668 aaKnown RBP11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 MYO3BQ8WXR4 1341 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 A0A0D9SFI3 127 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 HSPD1P10809 573 aaKnown RBP11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 ZSCAN23Q3MJ62 389 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 APOL6Q9BWW8 343 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 FGAP02671 866 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 BIRC2Q13490 618 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 NOC4LQ9BVI4 516 aaKnown RBP11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 ABCC4O15439 1325 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 SASH1O94885 1247 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 P4HA1P13674 534 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 TECP42680 631 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 DIXDC1Q155Q3 683 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 RPS6KC1Q96S38 1066 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 GBP3Q9H0R5 595 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 C1orf167Q5SNV9 1468 aa11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 PPRC1Q5VV67 1664 aaKnown RBP11.95□□□□□ -0.5
SYNPO2-201ENST00000307142 LMBR1Q8WVP7 490 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 KDM3AQ9Y4C1 1321 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 M0R2C6 588 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 CACNB3P54284 484 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 NRBP2Q9NSY0 501 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 PCDHA12Q9UN75 941 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 CEP170BQ9Y4F5 1589 aaPredicted RBP11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 KIAA0754O94854 1291 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 KCNG1Q9UIX4 513 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 EXOC3O60645 756 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 SLC16A2P36021 539 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 LIG4P49917 911 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 ATL3Q6DD88 541 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 BLIDQ8IZY5 108 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 KANSL2Q9H9L4 492 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 SPATA31A1Q5TZJ5 1347 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 BMP3P12645 472 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 COA7Q96BR5 231 aa11.94□□□□□ -0.5
SYNPO2-201ENST00000307142 EZH2Q15910 746 aaKnown RBP11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 ASPRV1Q53RT3 343 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 SMIM5Q71RC9 77 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 CYP19A1P11511 503 aaPredicted RBP11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 HOXD10P28358 340 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 PPP1R2P41236 205 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 RDH13Q8NBN7 331 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 IFRD2Q12894 506 aaPredicted RBP11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 DMP1Q13316 513 aaPredicted RBP11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 UBE3CQ15386 1083 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 RIOK1Q9BRS2 568 aaKnown RBP11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 KCNH3Q9ULD8 1083 aa11.93□□□□□ -0.5
SYNPO2-201ENST00000307142 FMNL3Q8IVF7 1028 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms