RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 USPL1Q5W0Q7 1092 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 KIAA0825Q8IV33 1275 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 LRRC8AQ8IWT6 810 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 MRFAP1L1Q96HT8 127 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 MRPL44Q9H9J2 332 aaKnown RBP23.11■■□□□ 1.29
LTBP3-201ENST00000301873 PRKG1Q13976 671 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 VTI1AQ96AJ9 217 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.11■■□□□ 1.29
LTBP3-201ENST00000301873 FRMPD2Q68DX3 1309 aaPredicted RBP23.11■■□□□ 1.29
LTBP3-201ENST00000301873 SLC39A14Q15043 492 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 PTPN21Q16825 1174 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 WDR44Q5JSH3 913 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 SEL1L2Q5TEA6 688 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 IFIH1Q9BYX4 1025 aaKnown RBP23.11■■□□□ 1.29
LTBP3-201ENST00000301873 RTEL1Q9NZ71 1219 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 PCDHA12Q9UN75 941 aa23.11■■□□□ 1.29
LTBP3-201ENST00000301873 TPH2Q8IWU9 490 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 PUS7LQ9H0K6 701 aaKnown RBP23.1■■□□□ 1.29
LTBP3-201ENST00000301873 PRKAB2O43741 272 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 STAMBPO95630 424 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 DPCR1Q3MIW9 517 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 CCDC121Q6ZUS5 278 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 GPATCH11Q8N954 259 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 GPR108Q9NPR9 543 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 USP21Q9UK80 565 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 COBLO75128 1261 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 GPHNQ9NQX3 736 aaPredicted RBP23.1■■□□□ 1.29
LTBP3-201ENST00000301873 CTTNBP2NLQ9P2B4 639 aa23.1■■□□□ 1.29
LTBP3-201ENST00000301873 KCNJ18B7U540 433 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 POLD1P28340 1107 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 KCNJ12Q14500 433 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 CCDC6Q16204 474 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 PI4K2BQ8TCG2 481 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 STMN4Q9H169 189 aaPredicted RBP23.09■■□□□ 1.29
LTBP3-201ENST00000301873 CRKLP46109 303 aaKnown RBP23.09■■□□□ 1.29
LTBP3-201ENST00000301873 ZNF354CQ86Y25 554 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 ANKS4BQ8N8V4 417 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 CALUO43852 315 aaPredicted RBP23.09■■□□□ 1.29
LTBP3-201ENST00000301873 NCBP1Q09161 790 aaKnown RBP23.09■■□□□ 1.29
LTBP3-201ENST00000301873 TUBB2AQ13885 445 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 ARHGAP44Q17R89 818 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 FMNL3Q8IVF7 1028 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 TEKT1Q969V4 418 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 TUBB2BQ9BVA1 445 aa23.09■■□□□ 1.29
LTBP3-201ENST00000301873 SND1Q7KZF4 910 aaKnown RBP eCLIP23.08■■□□□ 1.29
LTBP3-201ENST00000301873 CCDC63Q8NA47 563 aa23.08■■□□□ 1.29
LTBP3-201ENST00000301873 KDM5DQ9BY66 1539 aa23.08■■□□□ 1.29
LTBP3-201ENST00000301873 NECTIN1Q15223 517 aa23.08■■□□□ 1.29
LTBP3-201ENST00000301873 DOK7Q18PE1 504 aa23.08■■□□□ 1.29
LTBP3-201ENST00000301873 TSNARE1Q96NA8 513 aa23.08■■□□□ 1.29
LTBP3-201ENST00000301873 CARD10Q9BWT7 1032 aa23.08■■□□□ 1.29
LTBP3-201ENST00000301873 M0R2C6 588 aa23.08■■□□□ 1.28
LTBP3-201ENST00000301873 MXRA7P84157 204 aa23.08■■□□□ 1.28
LTBP3-201ENST00000301873 NR5A1Q13285 461 aa23.08■■□□□ 1.28
LTBP3-201ENST00000301873 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.08■■□□□ 1.28
LTBP3-201ENST00000301873 AIFM3Q96NN9 605 aa23.08■■□□□ 1.28
LTBP3-201ENST00000301873 A0A1W2PQ27 194 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 A0A1W2PQ64 194 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 A0A1W2PQD8 194 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 NDUFAB1O14561 156 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 MORC3Q14149 939 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 SYMPKQ92797 1274 aaKnown RBP23.07■■□□□ 1.28
LTBP3-201ENST00000301873 KIFC2Q96AC6 838 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 CIAO1O76071 339 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 SLFNL1Q499Z3 407 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 CEP57Q86XR8 500 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 RASGRP4Q8TDF6 673 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 STX10O60499 249 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
LTBP3-201ENST00000301873 DAAM2Q86T65 1068 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 TMEM87AQ8NBN3 555 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 MRRFQ96E11 262 aaKnown RBP23.07■■□□□ 1.28
LTBP3-201ENST00000301873 PSTPIP2Q9H939 334 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 SLC39A2Q9NP94 309 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 ATP8A2Q9NTI2 1148 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 DYNLL1P63167 89 aaKnown RBP23.07■■□□□ 1.28
LTBP3-201ENST00000301873 DLGAP5Q15398 846 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 FAM182BQ5T319 152 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 PICK1Q9NRD5 415 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 RCOR1Q9UKL0 485 aa23.07■■□□□ 1.28
LTBP3-201ENST00000301873 FLOT1O75955 427 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 CDC25AP30304 524 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 C6orf163Q5TEZ5 329 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 SFMBT2Q5VUG0 894 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 NEK8Q86SG6 692 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 ANKRD13CQ8N6S4 541 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 IFT74Q96LB3 600 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 SAR1BQ9Y6B6 198 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 SAMD9LQ8IVG5 1584 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 PTPROQ16827 1216 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 PRR16Q569H4 304 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 EPHA10Q5JZY3 1008 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 CARMIL3Q8ND23 1372 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 RPS6KA1Q15418 735 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 NBPF14Q5TI25 921 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 AFAP1L1Q8TED9 768 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 KIFAP3Q92845 792 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 PPP2R2CQ9Y2T4 447 aa23.06■■□□□ 1.28
LTBP3-201ENST00000301873 OR52Z1P0C646 297 aa23.05■■□□□ 1.28
LTBP3-201ENST00000301873 IRX5P78411 483 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms