RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 ANKRD45Q5TZF3 282 aa21.86■■□□□ 1.09
TMEM88-201ENST00000301599 CRISPLD2Q9H0B8 497 aa21.86■■□□□ 1.09
TMEM88-201ENST00000301599 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.86■■□□□ 1.09
TMEM88-201ENST00000301599 KANSL2Q9H9L4 492 aa21.86■■□□□ 1.09
TMEM88-201ENST00000301599 MKI67P46013 3256 aaKnown RBP21.86■■□□□ 1.09
TMEM88-201ENST00000301599 SPDYE16A6NNV3 312 aaPredicted RBP21.85■■□□□ 1.09
TMEM88-201ENST00000301599 FARP2O94887 1054 aaPredicted RBP21.85■■□□□ 1.09
TMEM88-201ENST00000301599 SLC34A2O95436 690 aa21.85■■□□□ 1.09
TMEM88-201ENST00000301599 PI4K2BQ8TCG2 481 aa21.85■■□□□ 1.09
TMEM88-201ENST00000301599 TRIB2Q92519 343 aa21.85■■□□□ 1.09
TMEM88-201ENST00000301599 TANGO6Q9C0B7 1094 aa21.85■■□□□ 1.09
TMEM88-201ENST00000301599 BTBD7Q9P203 1132 aa21.85■■□□□ 1.09
TMEM88-201ENST00000301599 MINDY4BA8MYZ0 360 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 GPAA1O43292 621 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 APPP05067 770 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 MX1P20591 662 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 TRIM32Q13049 653 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 AAMPQ13685 434 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 WDR78Q5VTH9 848 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 OTUD7AQ8TE49 926 aaPredicted RBP21.84■■□□□ 1.09
TMEM88-201ENST00000301599 VCPKMTQ9H867 229 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 MKNK2Q9HBH9 465 aa21.84■■□□□ 1.09
TMEM88-201ENST00000301599 SLC15A5A6NIM6 579 aa21.83■■□□□ 1.09
TMEM88-201ENST00000301599 PATL2C9JE40 543 aaKnown RBP21.83■■□□□ 1.09
TMEM88-201ENST00000301599 EEF2P13639 858 aaKnown RBP21.83■■□□□ 1.09
TMEM88-201ENST00000301599 PTPREP23469 700 aa21.83■■□□□ 1.09
TMEM88-201ENST00000301599 ATP2B2Q01814 1243 aa21.83■■□□□ 1.09
TMEM88-201ENST00000301599 MAP2K5Q13163 448 aa21.83■■□□□ 1.09
TMEM88-201ENST00000301599 HDAC1Q13547 482 aaPredicted RBP21.83■■□□□ 1.09
TMEM88-201ENST00000301599 KIAA1755Q5JYT7 1200 aa21.83■■□□□ 1.09
TMEM88-201ENST00000301599 IVNS1ABPQ9Y6Y0 642 aa21.83■■□□□ 1.09
TMEM88-201ENST00000301599 MYH7P12883 1935 aa21.82■■□□□ 1.08
TMEM88-201ENST00000301599 ZKSCAN1P17029 563 aaPredicted RBP21.82■■□□□ 1.08
TMEM88-201ENST00000301599 DSG3P32926 999 aa21.82■■□□□ 1.08
TMEM88-201ENST00000301599 MAP3K21Q5TCX8 1036 aa21.82■■□□□ 1.08
TMEM88-201ENST00000301599 CLEC10AQ8IUN9 316 aa21.82■■□□□ 1.08
TMEM88-201ENST00000301599 MB21D1Q8N884 522 aa21.82■■□□□ 1.08
TMEM88-201ENST00000301599 FSD1Q9BTV5 496 aa21.82■■□□□ 1.08
TMEM88-201ENST00000301599 ZNF287Q9HBT7 754 aa21.82■■□□□ 1.08
TMEM88-201ENST00000301599 BAZ2AQ9UIF9 1905 aaKnown RBP21.82■■□□□ 1.08
TMEM88-201ENST00000301599 H0YGN5 161 aa21.81■■□□□ 1.08
TMEM88-201ENST00000301599 M0R2C6 588 aa21.81■■□□□ 1.08
TMEM88-201ENST00000301599 WDR46O15213 610 aaKnown RBP21.81■■□□□ 1.08
TMEM88-201ENST00000301599 PRKAR2AP13861 404 aaKnown RBP21.81■■□□□ 1.08
TMEM88-201ENST00000301599 TDO2P48775 406 aa21.81■■□□□ 1.08
TMEM88-201ENST00000301599 SPICE1Q8N0Z3 855 aa21.81■■□□□ 1.08
TMEM88-201ENST00000301599 ANKLE1Q8NAG6 615 aa21.81■■□□□ 1.08
TMEM88-201ENST00000301599 APBA2Q99767 749 aa21.81■■□□□ 1.08
TMEM88-201ENST00000301599 NACAP1Q9BZK3 213 aa21.81■■□□□ 1.08
TMEM88-201ENST00000301599 STRNO43815 780 aa21.8■■□□□ 1.08
TMEM88-201ENST00000301599 FLOT1O75955 427 aa21.8■■□□□ 1.08
TMEM88-201ENST00000301599 CACNB2Q08289 660 aaPredicted RBP21.8■■□□□ 1.08
TMEM88-201ENST00000301599 IFNL3Q8IZI9 196 aa21.8■■□□□ 1.08
TMEM88-201ENST00000301599 ZNF444Q8N0Y2 327 aaPredicted RBP21.8■■□□□ 1.08
TMEM88-201ENST00000301599 STK11IPQ8N1F8 1099 aa21.8■■□□□ 1.08
TMEM88-201ENST00000301599 GOPCQ9HD26 462 aa21.8■■□□□ 1.08
TMEM88-201ENST00000301599 NR2E3Q9Y5X4 410 aa21.8■■□□□ 1.08
TMEM88-201ENST00000301599 RASA1P20936 1047 aa21.79■■□□□ 1.08
TMEM88-201ENST00000301599 CCL14Q16627 93 aa21.79■■□□□ 1.08
TMEM88-201ENST00000301599 ZMYM1Q5SVZ6 1142 aa21.79■■□□□ 1.08
TMEM88-201ENST00000301599 NECAB2Q7Z6G3 386 aa21.79■■□□□ 1.08
TMEM88-201ENST00000301599 SHCBP1Q8NEM2 672 aa21.79■■□□□ 1.08
TMEM88-201ENST00000301599 PAWRQ96IZ0 340 aaKnown RBP21.79■■□□□ 1.08
TMEM88-201ENST00000301599 SEC62Q99442 399 aaKnown RBP21.79■■□□□ 1.08
TMEM88-201ENST00000301599 MOV10L1Q9BXT6 1211 aaKnown RBP21.79■■□□□ 1.08
TMEM88-201ENST00000301599 SPATC1LQ9H0A9 340 aa21.79■■□□□ 1.08
TMEM88-201ENST00000301599 STAP2Q9UGK3 403 aa21.79■■□□□ 1.08
TMEM88-201ENST00000301599 PLXNB2O15031 1838 aa21.78■■□□□ 1.08
TMEM88-201ENST00000301599 HOXC6P09630 235 aa21.78■■□□□ 1.08
TMEM88-201ENST00000301599 HABP4Q5JVS0 413 aaKnown RBP21.78■■□□□ 1.08
TMEM88-201ENST00000301599 MFSD14CQ5VZR4 134 aa21.78■■□□□ 1.08
TMEM88-201ENST00000301599 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.78■■□□□ 1.08
TMEM88-201ENST00000301599 EPB41L4AQ9HCS5 686 aaPredicted RBP21.78■■□□□ 1.08
TMEM88-201ENST00000301599 NYAP2Q9P242 653 aa21.78■■□□□ 1.08
TMEM88-201ENST00000301599 SALL3Q9BXA9 1300 aa21.78■■□□□ 1.08
TMEM88-201ENST00000301599 RAD21O60216 631 aa21.77■■□□□ 1.08
TMEM88-201ENST00000301599 GRB14Q14449 540 aa21.77■■□□□ 1.08
TMEM88-201ENST00000301599 PLS1Q14651 629 aa21.77■■□□□ 1.08
TMEM88-201ENST00000301599 EVI5LQ96CN4 794 aa21.77■■□□□ 1.08
TMEM88-201ENST00000301599 ATG4CQ96DT6 458 aa21.77■■□□□ 1.08
TMEM88-201ENST00000301599 RWDD1Q9H446 243 aaPredicted RBP21.77■■□□□ 1.08
TMEM88-201ENST00000301599 MROH8Q9H579 483 aa21.77■■□□□ 1.08
TMEM88-201ENST00000301599 OGDHLQ9ULD0 1010 aa21.77■■□□□ 1.08
TMEM88-201ENST00000301599 SLC3A2P08195 630 aaKnown RBP21.76■■□□□ 1.07
TMEM88-201ENST00000301599 ERCC3P19447 782 aa21.76■■□□□ 1.07
TMEM88-201ENST00000301599 PDE1AP54750 535 aa21.76■■□□□ 1.07
TMEM88-201ENST00000301599 SAMD1Q6SPF0 538 aaPredicted RBP21.76■■□□□ 1.07
TMEM88-201ENST00000301599 DPP9Q86TI2 863 aa21.76■■□□□ 1.07
TMEM88-201ENST00000301599 ADAMTS5Q9UNA0 930 aa21.76■■□□□ 1.07
TMEM88-201ENST00000301599 ROBO3Q96MS0 1386 aa21.75■■□□□ 1.07
TMEM88-201ENST00000301599 MYH8P13535 1937 aa21.75■■□□□ 1.07
TMEM88-201ENST00000301599 EVI5O60447 810 aa21.75■■□□□ 1.07
TMEM88-201ENST00000301599 PDE4BQ07343 736 aa21.75■■□□□ 1.07
TMEM88-201ENST00000301599 NBPF3Q9H094 633 aa21.75■■□□□ 1.07
TMEM88-201ENST00000301599 NAPBQ9H115 298 aa21.75■■□□□ 1.07
TMEM88-201ENST00000301599 SLC5A4Q9NY91 659 aa21.75■■□□□ 1.07
TMEM88-201ENST00000301599 SLC25A27O95847 323 aa21.74■■□□□ 1.07
TMEM88-201ENST00000301599 CCND3P30281 292 aaPredicted RBP21.74■■□□□ 1.07
TMEM88-201ENST00000301599 NCAPG2Q86XI2 1143 aa21.74■■□□□ 1.07
TMEM88-201ENST00000301599 NPLOC4Q8TAT6 608 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms