RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 MAGEB6Q8N7X4 407 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 NELFBQ8WX92 580 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 SMARCAL1Q9NZC9 954 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 ADD2P35612 726 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 FBXL16Q8N461 479 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 FAM169AQ9Y6X4 670 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 IDEP14735 1019 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 PDE6AP16499 860 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 ERCC3P19447 782 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 EZH2Q15910 746 aaKnown RBP16.51■□□□□ 0.23
COL6A2-201ENST00000300527 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
COL6A2-201ENST00000300527 CENPHQ9H3R5 247 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 IQSEC3Q9UPP2 1182 aaPredicted RBP16.51■□□□□ 0.23
COL6A2-201ENST00000300527 DUSP10Q9Y6W6 482 aa16.51■□□□□ 0.23
COL6A2-201ENST00000300527 SHTN1A0MZ66 631 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 EXOC5O00471 708 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 WNT7AO00755 349 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 CYP27B1O15528 508 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 PHKA1P46020 1223 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 SMCR8Q8TEV9 937 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-201ENST00000300527 UBAC1Q9BSL1 405 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 LUC7L2Q9Y383 392 aaKnown RBP16.5■□□□□ 0.23
COL6A2-201ENST00000300527 MYH15Q9Y2K3 1946 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 TTC26A0AVF1 554 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 CXCR5P32302 372 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 CUL4BQ13620 913 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 TTF1Q15361 905 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-201ENST00000300527 COG1Q8WTW3 980 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 KDM3BQ7LBC6 1761 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-201ENST00000300527 A0A087WUV0 522 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-201ENST00000300527 PPP1R3GB7ZBB8 358 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 TUBB2AQ13885 445 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 RRP36Q96EU6 259 aaKnown RBP16.5■□□□□ 0.23
COL6A2-201ENST00000300527 TUBB2BQ9BVA1 445 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 MTMR7Q9Y216 660 aa16.5■□□□□ 0.23
COL6A2-201ENST00000300527 ZPR1O75312 459 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 MCM7P33993 719 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 MYCBPQ99417 103 aaPredicted RBP16.49■□□□□ 0.23
COL6A2-201ENST00000300527 MRC1P22897 1456 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 IFNAR1P17181 557 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 PAK1Q13153 545 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 REXO2Q9Y3B8 237 aaKnown RBP16.49■□□□□ 0.23
COL6A2-201ENST00000300527 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
COL6A2-201ENST00000300527 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 CCDC70Q6NSX1 233 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 MMS22LQ6ZRQ5 1243 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 KAT2BQ92831 832 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 CAPS2Q9BXY5 557 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
COL6A2-201ENST00000300527 RGPD2P0DJD1 1756 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 DEXIO95424 95 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 TRIM21P19474 475 aaKnown RBP16.48■□□□□ 0.23
COL6A2-201ENST00000300527 INPP5BP32019 993 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 IRAK1P51617 712 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 NAP1L1P55209 391 aaKnown RBP16.48■□□□□ 0.23
COL6A2-201ENST00000300527 PDCLQ13371 301 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 RNF187Q5TA31 235 aaPredicted RBP16.48■□□□□ 0.23
COL6A2-201ENST00000300527 NT5DC1Q5TFE4 455 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 CDKAL1Q5VV42 579 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 ANKRD18AQ8IVF6 992 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 CAPN7Q9Y6W3 813 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 AMPD2Q01433 879 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 KRT28Q7Z3Y7 464 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 HDAC7Q8WUI4 952 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 EHD2Q9NZN4 543 aa16.48■□□□□ 0.23
COL6A2-201ENST00000300527 KDM6AO15550 1401 aaPredicted RBP16.48■□□□□ 0.23
COL6A2-201ENST00000300527 SMIM22K7EJ46 135 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 PBX1P40424 430 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 SH2D3CQ8N5H7 860 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 OR8K1Q8NGG5 319 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 CCDC51Q96ER9 411 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 PDE2AO00408 941 aaPredicted RBP16.47■□□□□ 0.23
COL6A2-201ENST00000300527 NDUFAB1O14561 156 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 RPS6KA5O75582 802 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 CRACR2BQ8N4Y2 399 aaPredicted RBP16.47■□□□□ 0.23
COL6A2-201ENST00000300527 TRIM47Q96LD4 638 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 LACRTQ9GZZ8 138 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 FOXP1Q9H334 677 aaPredicted RBP16.47■□□□□ 0.23
COL6A2-201ENST00000300527 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 PRPF6O94906 941 aaKnown RBP16.47■□□□□ 0.23
COL6A2-201ENST00000300527 PTGDRQ13258 359 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 TCIRG1Q13488 830 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 DCAF5Q96JK2 942 aa16.47■□□□□ 0.23
COL6A2-201ENST00000300527 EPB41L4AQ9HCS5 686 aaPredicted RBP16.47■□□□□ 0.23
COL6A2-201ENST00000300527 KLK7P49862 253 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 TCP11X2Q5H9J9 407 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 MCTP2Q6DN12 878 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 WDR93Q6P2C0 686 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 TRAPPC11Q7Z392 1133 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 ZNF654Q8IZM8 581 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 NCAPGQ9BPX3 1015 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 ZNHIT6Q9NWK9 470 aaKnown RBP16.46■□□□□ 0.23
COL6A2-201ENST00000300527 TACC3Q9Y6A5 838 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 CIAO1O76071 339 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 KIAA0754O94854 1291 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms