RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 TOP1P11387 765 aaKnown RBP26.56■■□□□ 1.84
LINC01116-201ENST00000295549 TM4SF4P48230 202 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 RBM25P49756 843 aaKnown RBP26.56■■□□□ 1.84
LINC01116-201ENST00000295549 EXOSC10Q01780 885 aaKnown RBP26.56■■□□□ 1.84
LINC01116-201ENST00000295549 SREBF2Q12772 1141 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 SEC23AQ15436 765 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 CCL15Q16663 113 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 CHST3Q7LGC8 479 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 IGDCC4Q8TDY8 1250 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 BRI3BPQ8WY22 251 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 C12orf42Q96LP6 360 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 ERICH2A1L162 156 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 IFIT3O14879 490 aaKnown RBP26.56■■□□□ 1.84
LINC01116-201ENST00000295549 TMEM87BQ96K49 555 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 TMEM47Q9BQJ4 181 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 VCPKMTQ9H867 229 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 ZSWIM6Q9HCJ5 1215 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 GOPCQ9HD26 462 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 TMOD4Q9NZQ9 345 aa26.56■■□□□ 1.84
LINC01116-201ENST00000295549 CEP350Q5VT06 3117 aa26.55■■□□□ 1.84
LINC01116-201ENST00000295549 CASTP20810 708 aaKnown RBP26.55■■□□□ 1.84
LINC01116-201ENST00000295549 BLOC1S2Q6QNY1 142 aa26.55■■□□□ 1.84
LINC01116-201ENST00000295549 GMCL1P1Q8NEA9 526 aa26.55■■□□□ 1.84
LINC01116-201ENST00000295549 LPAR1Q92633 364 aa26.55■■□□□ 1.84
LINC01116-201ENST00000295549 ZYXQ15942 572 aaKnown RBP26.54■■□□□ 1.84
LINC01116-201ENST00000295549 PTPN18Q99952 460 aa26.54■■□□□ 1.84
LINC01116-201ENST00000295549 F5H6K3 240 aa26.53■■□□□ 1.84
LINC01116-201ENST00000295549 RPS6KB1P23443 525 aa26.53■■□□□ 1.84
LINC01116-201ENST00000295549 KLRC3Q07444 240 aa26.53■■□□□ 1.84
LINC01116-201ENST00000295549 DGKZQ13574 1117 aa26.53■■□□□ 1.84
LINC01116-201ENST00000295549 TMEM67Q5HYA8 995 aa26.53■■□□□ 1.84
LINC01116-201ENST00000295549 IFIT1BQ5T764 474 aaKnown RBP26.53■■□□□ 1.84
LINC01116-201ENST00000295549 RUFY3Q7L099 469 aa26.53■■□□□ 1.84
LINC01116-201ENST00000295549 LRRC47Q8N1G4 583 aaKnown RBP26.53■■□□□ 1.84
LINC01116-201ENST00000295549 LIFRP42702 1097 aa26.52■■□□□ 1.84
LINC01116-201ENST00000295549 KIAA1755Q5JYT7 1200 aa26.52■■□□□ 1.84
LINC01116-201ENST00000295549 GPAT2Q6NUI2 795 aa26.52■■□□□ 1.84
LINC01116-201ENST00000295549 GADL1Q6ZQY3 521 aa26.52■■□□□ 1.84
LINC01116-201ENST00000295549 TMTC2Q8N394 836 aa26.52■■□□□ 1.84
LINC01116-201ENST00000295549 CYP46A1Q9Y6A2 500 aa26.52■■□□□ 1.84
LINC01116-201ENST00000295549 SH2B2O14492 632 aaPredicted RBP26.51■■□□□ 1.83
LINC01116-201ENST00000295549 CPA1P15085 419 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 WTAPQ15007 396 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 ANKRD23Q86SG2 305 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 FBXL16Q8N461 479 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 TBC1D32Q96NH3 1257 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 KAT14Q9H8E8 782 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 LY9Q9HBG7 655 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 AGTPBP1Q9UPW5 1226 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 SLC45A1Q9Y2W3 748 aa26.51■■□□□ 1.83
LINC01116-201ENST00000295549 BTBD19C9JJ37 291 aa26.5■■□□□ 1.83
LINC01116-201ENST00000295549 NDUFB10O96000 172 aa26.5■■□□□ 1.83
LINC01116-201ENST00000295549 VCAM1P19320 739 aa26.5■■□□□ 1.83
LINC01116-201ENST00000295549 IFNL1Q8IU54 200 aa26.5■■□□□ 1.83
LINC01116-201ENST00000295549 ZCCHC17Q9NP64 241 aaKnown RBP26.5■■□□□ 1.83
LINC01116-201ENST00000295549 IGF2BP3O00425 579 aaKnown RBP eCLIP26.49■■□□□ 1.83
LINC01116-201ENST00000295549 HOXA7P31268 230 aaPredicted RBP26.49■■□□□ 1.83
LINC01116-201ENST00000295549 TREML2Q5T2D2 321 aa26.49■■□□□ 1.83
LINC01116-201ENST00000295549 OTUD7BQ6GQQ9 843 aa26.49■■□□□ 1.83
LINC01116-201ENST00000295549 SPICE1Q8N0Z3 855 aa26.49■■□□□ 1.83
LINC01116-201ENST00000295549 PNMA1Q8ND90 353 aa26.49■■□□□ 1.83
LINC01116-201ENST00000295549 LRRC2Q9BYS8 371 aa26.49■■□□□ 1.83
LINC01116-201ENST00000295549 PTPRFP10586 1907 aa26.49■■□□□ 1.83
LINC01116-201ENST00000295549 THSD7BQ9C0I4 1608 aa26.49■■□□□ 1.83
LINC01116-201ENST00000295549 WDR46O15213 610 aaKnown RBP26.48■■□□□ 1.83
LINC01116-201ENST00000295549 SLFN13Q68D06 897 aa26.48■■□□□ 1.83
LINC01116-201ENST00000295549 FAM43AQ8N2R8 423 aa26.48■■□□□ 1.83
LINC01116-201ENST00000295549 GMCL1Q96IK5 515 aa26.48■■□□□ 1.83
LINC01116-201ENST00000295549 TCEANC2Q96MN5 208 aa26.48■■□□□ 1.83
LINC01116-201ENST00000295549 KIF2CQ99661 725 aa26.48■■□□□ 1.83
LINC01116-201ENST00000295549 UPF3BQ9BZI7 483 aaKnown RBP26.48■■□□□ 1.83
LINC01116-201ENST00000295549 SENP2Q9HC62 589 aa26.48■■□□□ 1.83
LINC01116-201ENST00000295549 GPHNQ9NQX3 736 aaPredicted RBP26.48■■□□□ 1.83
LINC01116-201ENST00000295549 PABPC4Q13310 644 aaKnown RBP eCLIP26.48■■□□□ 1.83
LINC01116-201ENST00000295549 SGMS1Q86VZ5 419 aa26.48■■□□□ 1.83
LINC01116-201ENST00000295549 AGXT2Q9BYV1 514 aa26.48■■□□□ 1.83
LINC01116-201ENST00000295549 RAD21O60216 631 aa26.47■■□□□ 1.83
LINC01116-201ENST00000295549 PCNTO95613 3336 aa26.47■■□□□ 1.83
LINC01116-201ENST00000295549 ALDH1A1P00352 501 aa26.47■■□□□ 1.83
LINC01116-201ENST00000295549 RPAP3Q9H6T3 665 aaPredicted RBP26.47■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L15C9J2P7 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L13C9JLJ4 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L11C9JVI0 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L18D6R9N7 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L22D6RA61 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L17D6RBQ6 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L19D6RCP7 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L20D6RJB6 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 PDHXO00330 501 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 SNHG28P0DPA3 235 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 MAP2K1Q02750 393 aaPredicted RBP26.46■■□□□ 1.83
LINC01116-201ENST00000295549 USP17L24Q0WX57 530 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 CATSPERGQ6ZRH7 1159 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 Q6ZUG5 572 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 DCAF4Q8WV16 495 aa26.46■■□□□ 1.83
LINC01116-201ENST00000295549 LOC285556D6RIA3 1793 aa26.45■■□□□ 1.83
LINC01116-201ENST00000295549 MYH4Q9Y623 1939 aa26.45■■□□□ 1.82
LINC01116-201ENST00000295549 SLC1A4P43007 532 aa26.45■■□□□ 1.82
LINC01116-201ENST00000295549 FGD1P98174 961 aa26.45■■□□□ 1.82
LINC01116-201ENST00000295549 ALDH8A1Q9H2A2 487 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms