RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
TPM1-202ENST00000288398 PRKAB2O43741 272 aa16.88■□□□□ 0.29
TPM1-202ENST00000288398 MSCO60682 206 aa16.88■□□□□ 0.29
TPM1-202ENST00000288398 CCND3P30281 292 aaPredicted RBP16.88■□□□□ 0.29
TPM1-202ENST00000288398 PLS1Q14651 629 aa16.88■□□□□ 0.29
TPM1-202ENST00000288398 MB21D1Q8N884 522 aa16.88■□□□□ 0.29
TPM1-202ENST00000288398 SLC44A5Q8NCS7 719 aa16.88■□□□□ 0.29
TPM1-202ENST00000288398 DYNLL2Q96FJ2 89 aa16.88■□□□□ 0.29
TPM1-202ENST00000288398 BTBD7Q9P203 1132 aa16.88■□□□□ 0.29
TPM1-202ENST00000288398 STAP2Q9UGK3 403 aa16.88■□□□□ 0.29
TPM1-202ENST00000288398 ZMYND8Q9ULU4 1186 aaPredicted RBP16.88■□□□□ 0.29
TPM1-202ENST00000288398 PLXNB2O15031 1838 aa16.87■□□□□ 0.29
TPM1-202ENST00000288398 STRNO43815 780 aa16.87■□□□□ 0.29
TPM1-202ENST00000288398 RAD21O60216 631 aa16.87■□□□□ 0.29
TPM1-202ENST00000288398 FLOT1O75955 427 aa16.87■□□□□ 0.29
TPM1-202ENST00000288398 A0A1W2PRG0 241 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 USP17L12C9JPN9 530 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 USP17L21D6R901 530 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 AKR1B1P15121 316 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 CDK8P49336 464 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 GRB14Q14449 540 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 C12orf60Q5U649 245 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 POTEEQ6S8J3 1075 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 SPICE1Q8N0Z3 855 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 SPATC1LQ9H0A9 340 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 ECHDC1Q9NTX5 307 aa16.86■□□□□ 0.29
TPM1-202ENST00000288398 ARPP21Q9UBL0 812 aaPredicted RBP16.86■□□□□ 0.29
TPM1-202ENST00000288398 WDR46O15213 610 aaKnown RBP16.85■□□□□ 0.29
TPM1-202ENST00000288398 SMARCA5O60264 1052 aaPredicted RBP16.85■□□□□ 0.29
TPM1-202ENST00000288398 EVX2Q03828 476 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 LRRFIP1Q32MZ4 808 aaKnown RBP16.85■□□□□ 0.29
TPM1-202ENST00000288398 SLFNL1Q499Z3 407 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 NCAPG2Q86XI2 1143 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 SHCBP1Q8NEM2 672 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 MOV10L1Q9BXT6 1211 aaKnown RBP16.85■□□□□ 0.29
TPM1-202ENST00000288398 MROH8Q9H579 483 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 VCPKMTQ9H867 229 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 KANSL2Q9H9L4 492 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 GOPCQ9HD26 462 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
TPM1-202ENST00000288398 HOXC6P09630 235 aa16.84■□□□□ 0.29
TPM1-202ENST00000288398 SYN1P17600 705 aa16.84■□□□□ 0.29
TPM1-202ENST00000288398 ERCC3P19447 782 aa16.84■□□□□ 0.29
TPM1-202ENST00000288398 ADORA2AP29274 412 aa16.84■□□□□ 0.29
TPM1-202ENST00000288398 DSG3P32926 999 aa16.84■□□□□ 0.29
TPM1-202ENST00000288398 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
TPM1-202ENST00000288398 C16orf86Q6ZW13 317 aa16.84■□□□□ 0.29
TPM1-202ENST00000288398 PRO3102Q9H379 93 aa16.84■□□□□ 0.29
TPM1-202ENST00000288398 DDX20Q9UHI6 824 aaKnown RBP16.84■□□□□ 0.29
TPM1-202ENST00000288398 CYP2D7A0A087X1C5 515 aa16.83■□□□□ 0.28
TPM1-202ENST00000288398 CYP2C19P33261 490 aa16.83■□□□□ 0.28
TPM1-202ENST00000288398 LHX8Q68G74 356 aa16.83■□□□□ 0.28
TPM1-202ENST00000288398 CLEC10AQ8IUN9 316 aa16.83■□□□□ 0.28
TPM1-202ENST00000288398 MKNK2Q9HBH9 465 aa16.83■□□□□ 0.28
TPM1-202ENST00000288398 FLRT1Q9NZU1 646 aa16.83■□□□□ 0.28
TPM1-202ENST00000288398 MYH8P13535 1937 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 PFASO15067 1338 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 SLC25A27O95847 323 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
TPM1-202ENST00000288398 FCER1AP12319 257 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 EEF2P13639 858 aaKnown RBP16.82■□□□□ 0.28
TPM1-202ENST00000288398 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
TPM1-202ENST00000288398 OLFML2BQ68BL8 750 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 CTR9Q6PD62 1173 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 NPLOC4Q8TAT6 608 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 ATG4CQ96DT6 458 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 UBE2OQ9C0C9 1292 aaKnown RBP16.82■□□□□ 0.28
TPM1-202ENST00000288398 SENP6Q9GZR1 1112 aaPredicted RBP16.82■□□□□ 0.28
TPM1-202ENST00000288398 PUS7LQ9H0K6 701 aaKnown RBP16.82■□□□□ 0.28
TPM1-202ENST00000288398 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 ZBTB47Q9UFB7 747 aaPredicted RBP16.82■□□□□ 0.28
TPM1-202ENST00000288398 PRKAG2Q9UGJ0 569 aa16.82■□□□□ 0.28
TPM1-202ENST00000288398 MINDY4BA8MYZ0 360 aa16.81■□□□□ 0.28
TPM1-202ENST00000288398 APPP05067 770 aa16.81■□□□□ 0.28
TPM1-202ENST00000288398 ZFYP08048 801 aaPredicted RBP16.81■□□□□ 0.28
TPM1-202ENST00000288398 BMP8BP34820 402 aa16.81■□□□□ 0.28
TPM1-202ENST00000288398 TDO2P48775 406 aa16.81■□□□□ 0.28
TPM1-202ENST00000288398 ABRAQ8N0Z2 381 aa16.81■□□□□ 0.28
TPM1-202ENST00000288398 KBTBD3Q8NAB2 608 aa16.81■□□□□ 0.28
TPM1-202ENST00000288398 ARRDC4Q8NCT1 418 aa16.81■□□□□ 0.28
TPM1-202ENST00000288398 GDF15Q99988 308 aa16.81■□□□□ 0.28
TPM1-202ENST00000288398 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
TPM1-202ENST00000288398 KBTBD13C9JR72 458 aa16.8■□□□□ 0.28
TPM1-202ENST00000288398 COL6A1P12109 1028 aa16.8■□□□□ 0.28
TPM1-202ENST00000288398 GNAT2P19087 354 aa16.8■□□□□ 0.28
TPM1-202ENST00000288398 COPB2P35606 906 aa16.8■□□□□ 0.28
TPM1-202ENST00000288398 MAGEA10P43363 369 aaPredicted RBP16.8■□□□□ 0.28
TPM1-202ENST00000288398 KCTD2Q14681 263 aa16.8■□□□□ 0.28
TPM1-202ENST00000288398 STK11IPQ8N1F8 1099 aa16.8■□□□□ 0.28
TPM1-202ENST00000288398 APPBP2Q92624 585 aa16.8■□□□□ 0.28
TPM1-202ENST00000288398 LBHD1Q9BQE6 289 aaPredicted RBP16.8■□□□□ 0.28
TPM1-202ENST00000288398 DCTPP1Q9H773 170 aa16.8■□□□□ 0.28
TPM1-202ENST00000288398 BAZ2AQ9UIF9 1905 aaKnown RBP16.8■□□□□ 0.28
TPM1-202ENST00000288398 MYH7P12883 1935 aa16.79■□□□□ 0.28
TPM1-202ENST00000288398 DNM1LO00429 736 aa16.79■□□□□ 0.28
TPM1-202ENST00000288398 ERC2O15083 957 aa16.79■□□□□ 0.28
TPM1-202ENST00000288398 RNF113AO15541 343 aaKnown RBP16.79■□□□□ 0.28
TPM1-202ENST00000288398 CHGBP05060 677 aa16.79■□□□□ 0.28
TPM1-202ENST00000288398 LRRC26Q2I0M4 334 aa16.79■□□□□ 0.28
TPM1-202ENST00000288398 KIAA1755Q5JYT7 1200 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms