RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 MAP3K14Q99558 947 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 LZTFL1Q9NQ48 299 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 EFCAB8A8MWE9 144 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 CYP26C1Q6V0L0 522 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 SIPA1L3O60292 1781 aaPredicted RBP11.34□□□□□ -0.59
HMGCR-201ENST00000287936 CCT6AP40227 531 aaKnown RBP11.34□□□□□ -0.59
HMGCR-201ENST00000287936 EPS15P42566 896 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 ST5P78524 1137 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 ENAHQ8N8S7 591 aaPredicted RBP11.34□□□□□ -0.59
HMGCR-201ENST00000287936 ANAPC4Q9UJX5 808 aa11.34□□□□□ -0.59
HMGCR-201ENST00000287936 ADAMTS7Q9UKP4 1686 aa11.33□□□□□ -0.59
HMGCR-201ENST00000287936 NTSR2O95665 410 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 TUBBP07437 444 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 GUCY1A2P33402 732 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 ERCC6LQ2NKX8 1250 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 ZNF804BA4D1E1 1349 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 CTAGE15A4D2H0 777 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 PARP1P09874 1014 aaKnown RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 CTAGE8P0CG41 777 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 KRT83P78385 493 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 ZNF569Q5MCW4 686 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 CTAGE6Q86UF2 777 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 CTAGE4Q8IX94 777 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 NELFBQ8WX92 580 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 PAGE5Q96GU1 130 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 LUC7L2Q9Y383 392 aaKnown RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 PKD1L3Q7Z443 1732 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 NAP1L1P55209 391 aaKnown RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 ASIC1P78348 528 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 MORC3Q14149 939 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 MAP9Q49MG5 647 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 USO1O60763 962 aaKnown RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 KRT18P05783 430 aaKnown RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 E4F1Q66K89 784 aaPredicted RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 ZNF710Q8N1W2 664 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 VPS16Q9H269 839 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
HMGCR-201ENST00000287936 MINPP1Q9UNW1 487 aa11.33□□□□□ -0.6
HMGCR-201ENST00000287936 KIF20AO95235 890 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 PLEKHA8P1O95397 391 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 TRIM21P19474 475 aaKnown RBP11.32□□□□□ -0.6
HMGCR-201ENST00000287936 ATP2B2Q01814 1243 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 PANX2Q96RD6 677 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 JAG2Q9Y219 1238 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 ORC4O43929 436 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
HMGCR-201ENST00000287936 BLZF1Q9H2G9 400 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 VAT1LQ9HCJ6 419 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 CYP2D7A0A087X1C5 515 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 FAM237AA0A1B0GTK4 181 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 TOM1O60784 492 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 IGSF3O75054 1194 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 MECOMQ03112 1051 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 UTP14CQ5TAP6 766 aaKnown RBP11.32□□□□□ -0.6
HMGCR-201ENST00000287936 ARL6IP4Q66PJ3 421 aaKnown RBP11.32□□□□□ -0.6
HMGCR-201ENST00000287936 CNBD1Q8NA66 436 aa11.32□□□□□ -0.6
HMGCR-201ENST00000287936 NONOQ15233 471 aaKnown RBP eCLIP11.31□□□□□ -0.6
HMGCR-201ENST00000287936 TEX11Q8IYF3 940 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 STAMQ92783 540 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
HMGCR-201ENST00000287936 TAB2Q9NYJ8 693 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 H7C1D1 291 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 CKAP4Q07065 602 aaKnown RBP11.31□□□□□ -0.6
HMGCR-201ENST00000287936 TRAPPC3LQ5T215 181 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 EPSTI1Q96J88 318 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 NAPGQ99747 312 aaPredicted RBP11.31□□□□□ -0.6
HMGCR-201ENST00000287936 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 SH3GLB2Q9NR46 395 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 KCND1Q9NSA2 647 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 C6orf229H3BNL8 230 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 LAD1O00515 517 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 RPN1P04843 607 aaKnown RBP11.31□□□□□ -0.6
HMGCR-201ENST00000287936 NCAPHQ15003 741 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 INTS5Q6P9B9 1019 aaKnown RBP11.31□□□□□ -0.6
HMGCR-201ENST00000287936 PHF20Q9BVI0 1012 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 ZSWIM4Q9H7M6 989 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 MAGEF1Q9HAY2 307 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 ZHX1Q9UKY1 873 aaPredicted RBP11.31□□□□□ -0.6
HMGCR-201ENST00000287936 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 KCNJ18B7U540 433 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 FOXP2O15409 715 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 KCNJ12Q14500 433 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 FAM98CQ17RN3 349 aaKnown RBP11.31□□□□□ -0.6
HMGCR-201ENST00000287936 CTR9Q6PD62 1173 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 DGKHQ86XP1 1220 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 DPF2Q92785 391 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 NUP58Q9BVL2 599 aa11.31□□□□□ -0.6
HMGCR-201ENST00000287936 FOXN1O15353 648 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 KRT86O43790 486 aa11.3□□□□□ -0.6
HMGCR-201ENST00000287936 MYL1P05976 194 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms