RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 MTMR4Q9NYA4 1195 aa21.8■■□□□ 1.08
VBP1-201ENST00000286428 VPS54Q9P1Q0 977 aa21.8■■□□□ 1.08
VBP1-201ENST00000286428 CUTAO60888 179 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 TTLL1O95922 423 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 NLRP5P59047 1200 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 CCDC12Q8WUD4 166 aaPredicted RBP21.79■■□□□ 1.08
VBP1-201ENST00000286428 FUCA2Q9BTY2 467 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 PANK2Q9BZ23 570 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 FOCADQ5VW36 1801 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 UBE2Q2LH0YL09 131 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 CAMK4Q16566 473 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 DALRD3Q5D0E6 543 aaKnown RBP21.79■■□□□ 1.08
VBP1-201ENST00000286428 NIM1KQ8IY84 436 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 ENGASEQ8NFI3 743 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 SPZ1Q9BXG8 430 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 MYH1P12882 1939 aa21.79■■□□□ 1.08
VBP1-201ENST00000286428 VIL1P09327 827 aaKnown RBP21.78■■□□□ 1.08
VBP1-201ENST00000286428 TRAPPC10P48553 1259 aa21.78■■□□□ 1.08
VBP1-201ENST00000286428 PTPAQ15257 358 aa21.78■■□□□ 1.08
VBP1-201ENST00000286428 CFAP100Q494V2 611 aa21.78■■□□□ 1.08
VBP1-201ENST00000286428 CDK5RAP2Q96SN8 1893 aa21.78■■□□□ 1.08
VBP1-201ENST00000286428 YDJCA8MPS7 323 aa21.77■■□□□ 1.08
VBP1-201ENST00000286428 KLRF2D3W0D1 207 aa21.77■■□□□ 1.08
VBP1-201ENST00000286428 SNW1Q13573 536 aaKnown RBP21.77■■□□□ 1.08
VBP1-201ENST00000286428 ASPRV1Q53RT3 343 aa21.77■■□□□ 1.08
VBP1-201ENST00000286428 ZSCAN29Q8IWY8 852 aaPredicted RBP21.77■■□□□ 1.08
VBP1-201ENST00000286428 KRI1Q8N9T8 703 aaKnown RBP21.77■■□□□ 1.08
VBP1-201ENST00000286428 TRIM44Q96DX7 344 aaPredicted RBP21.77■■□□□ 1.08
VBP1-201ENST00000286428 CABP5Q9NP86 173 aa21.77■■□□□ 1.08
VBP1-201ENST00000286428 ZNRF3Q9ULT6 936 aa21.77■■□□□ 1.08
VBP1-201ENST00000286428 IGKV6D-41A0A0C4DH26 115 aa21.76■■□□□ 1.07
VBP1-201ENST00000286428 hCG_1984214I3L0E3 225 aa21.76■■□□□ 1.07
VBP1-201ENST00000286428 FMR1NBQ8N0W7 255 aaPredicted RBP21.76■■□□□ 1.07
VBP1-201ENST00000286428 ZNF713Q8N859 430 aaPredicted RBP21.76■■□□□ 1.07
VBP1-201ENST00000286428 AGBL3Q8NEM8 1001 aa21.76■■□□□ 1.07
VBP1-201ENST00000286428 TIGD1Q96MW7 591 aa21.76■■□□□ 1.07
VBP1-201ENST00000286428 SDF4Q9BRK5 362 aa21.76■■□□□ 1.07
VBP1-201ENST00000286428 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
VBP1-201ENST00000286428 ZBTB7AO95365 584 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 NFIAQ12857 509 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 AXDND1Q5T1B0 1012 aaPredicted RBP21.75■■□□□ 1.07
VBP1-201ENST00000286428 STAG2Q8N3U4 1231 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 RRP36Q96EU6 259 aaKnown RBP21.75■■□□□ 1.07
VBP1-201ENST00000286428 PPP1R9BQ96SB3 815 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 TRIM75PA6NK02 468 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 SHMT1P34896 483 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 TYRO3Q06418 890 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 NR5A1Q13285 461 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 ZNF579Q8NAF0 562 aaKnown RBP21.75■■□□□ 1.07
VBP1-201ENST00000286428 RNF214Q8ND24 703 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 GOLPH3LQ9H4A5 285 aa21.75■■□□□ 1.07
VBP1-201ENST00000286428 COL2A1P02458 1487 aaPredicted RBP21.75■■□□□ 1.07
VBP1-201ENST00000286428 AKR1B1P15121 316 aa21.74■■□□□ 1.07
VBP1-201ENST00000286428 MARCKSP29966 332 aaPredicted RBP21.74■■□□□ 1.07
VBP1-201ENST00000286428 ZRSR1Q15695 479 aaKnown RBP21.74■■□□□ 1.07
VBP1-201ENST00000286428 JDP2Q8WYK2 163 aa21.74■■□□□ 1.07
VBP1-201ENST00000286428 ZNF277Q9NRM2 450 aaPredicted RBP21.74■■□□□ 1.07
VBP1-201ENST00000286428 FAM13BQ9NYF5 915 aa21.74■■□□□ 1.07
VBP1-201ENST00000286428 CD2APQ9Y5K6 639 aa21.74■■□□□ 1.07
VBP1-201ENST00000286428 FAM237AA0A1B0GTK4 181 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 A0A1B0GVL5 298 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 hCG_1642624A0A1W2PR95 340 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 MPHOSPH10O00566 681 aaKnown RBP21.73■■□□□ 1.07
VBP1-201ENST00000286428 TOB1P50616 345 aaPredicted RBP21.73■■□□□ 1.07
VBP1-201ENST00000286428 DLGAP5Q15398 846 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 CERKLQ49MI3 558 aaPredicted RBP21.73■■□□□ 1.07
VBP1-201ENST00000286428 GPATCH4Q5T3I0 446 aaKnown RBP21.73■■□□□ 1.07
VBP1-201ENST00000286428 CCDC34Q96HJ3 373 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 KANSL2Q9H9L4 492 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 CLIP2Q9UDT6 1046 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 FAM198AQ9UFP1 575 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 HOOK1Q9UJC3 728 aaKnown RBP21.73■■□□□ 1.07
VBP1-201ENST00000286428 PCDHA4Q9UN74 947 aa21.73■■□□□ 1.07
VBP1-201ENST00000286428 ZNF202O95125 648 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 GNA11P29992 359 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 NDUFA8P51970 172 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 TCP10Q12799 353 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 METTL16Q86W50 562 aaKnown RBP21.72■■□□□ 1.07
VBP1-201ENST00000286428 CKAP2LQ8IYA6 745 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 BLIDQ8IZY5 108 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 FAM200AQ8TCP9 573 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 OXER1Q8TDS5 423 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 TAOK3Q9H2K8 898 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 BARHL2Q9NY43 387 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 ATF5Q9Y2D1 282 aaPredicted RBP21.72■■□□□ 1.07
VBP1-201ENST00000286428 KIF13BQ9NQT8 1826 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 ATRNL1Q5VV63 1379 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 ECM29Q5VYK3 1845 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 PSMD14O00487 310 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 MYO1BO43795 1136 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 PDHBP11177 359 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 PTPREP23469 700 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 SYKP43405 635 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 TATDN1Q6P1N9 297 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 ELOA2Q8IYF1 753 aaPredicted RBP21.72■■□□□ 1.07
VBP1-201ENST00000286428 DAGLBQ8NCG7 672 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 GMLQ99445 158 aa21.72■■□□□ 1.07
VBP1-201ENST00000286428 TDRD3Q9H7E2 651 aaKnown RBP21.72■■□□□ 1.07
VBP1-201ENST00000286428 HERC5Q9UII4 1024 aaKnown RBP21.72■■□□□ 1.07
VBP1-201ENST00000286428 SRPRBQ9Y5M8 271 aaKnown RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms