RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 ZCCHC17Q9NP64 241 aaKnown RBP22.32■■□□□ 1.16
CSPG5-201ENST00000264723 PLEKHA8P1O95397 391 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 CCDC122Q5T0U0 273 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 TAF3Q5VWG9 929 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 OGFOD1Q8N543 542 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 LY9Q9HBG7 655 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 IKBKBO14920 756 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 FMNL1O95466 1100 aaPredicted RBP22.32■■□□□ 1.16
CSPG5-201ENST00000264723 APBA3O96018 575 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 OAS2P29728 719 aaKnown RBP22.32■■□□□ 1.16
CSPG5-201ENST00000264723 TXKP42681 527 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 TOGARAM2Q6ZUX3 1019 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 PNMA1Q8ND90 353 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.32■■□□□ 1.16
CSPG5-201ENST00000264723 RIPOR2Q9Y4F9 1068 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 SOS2Q07890 1332 aaPredicted RBP22.32■■□□□ 1.16
CSPG5-201ENST00000264723 KIF20AO95235 890 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 IFNAR1P17181 557 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 PRDX5P30044 214 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 MTF1Q14872 753 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 VSTM4Q8IW00 320 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 ARID4AP29374 1257 aaPredicted RBP22.31■■□□□ 1.16
CSPG5-201ENST00000264723 ILDR1Q86SU0 546 aaPredicted RBP22.31■■□□□ 1.16
CSPG5-201ENST00000264723 RBL2Q08999 1139 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 ZYXQ15942 572 aaKnown RBP22.31■■□□□ 1.16
CSPG5-201ENST00000264723 DNAJC21Q5F1R6 531 aaKnown RBP22.31■■□□□ 1.16
CSPG5-201ENST00000264723 METTL16Q86W50 562 aaKnown RBP22.31■■□□□ 1.16
CSPG5-201ENST00000264723 CNGA4Q8IV77 575 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 NELFBQ8WX92 580 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 USP17L8P0C7I0 530 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 GNA11P29992 359 aa22.31■■□□□ 1.16
CSPG5-201ENST00000264723 DHX37Q8IY37 1157 aaKnown RBP22.31■■□□□ 1.16
CSPG5-201ENST00000264723 TTF2Q9UNY4 1162 aaKnown RBP22.31■■□□□ 1.16
CSPG5-201ENST00000264723 NMT2O60551 498 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 CAPN2P17655 700 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 TSG101Q99816 390 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 TEX33O43247 280 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 DYNLL2Q96FJ2 89 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 PAK1Q13153 545 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 TRIM28Q13263 835 aaKnown RBP22.3■■□□□ 1.16
CSPG5-201ENST00000264723 TMEM132AQ24JP5 1023 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 KIAA0825Q8IV33 1275 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 ACRBPQ8NEB7 543 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 DDX41Q9UJV9 622 aaKnown RBP22.3■■□□□ 1.16
CSPG5-201ENST00000264723 SAMM50Q9Y512 469 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 MEGF6O75095 1541 aa22.3■■□□□ 1.16
CSPG5-201ENST00000264723 ENC1O14682 589 aa22.29■■□□□ 1.16
CSPG5-201ENST00000264723 CCNT1O60563 726 aaKnown RBP22.29■■□□□ 1.16
CSPG5-201ENST00000264723 GABPB1Q06547 395 aaPredicted RBP22.29■■□□□ 1.16
CSPG5-201ENST00000264723 TBC1D8BQ0IIM8 1120 aa22.29■■□□□ 1.16
CSPG5-201ENST00000264723 EYA3Q99504 573 aa22.29■■□□□ 1.16
CSPG5-201ENST00000264723 ANKRD26Q9UPS8 1709 aa22.29■■□□□ 1.16
CSPG5-201ENST00000264723 SPAG1Q07617 926 aa22.29■■□□□ 1.16
CSPG5-201ENST00000264723 RMND1Q9NWS8 449 aa22.29■■□□□ 1.16
CSPG5-201ENST00000264723 SMC1AQ14683 1233 aaKnown RBP22.28■■□□□ 1.16
CSPG5-201ENST00000264723 RESP18Q5W5W9 173 aa22.28■■□□□ 1.16
CSPG5-201ENST00000264723 TBC1D9BQ66K14 1250 aa22.28■■□□□ 1.16
CSPG5-201ENST00000264723 WWC2Q6AWC2 1192 aa22.28■■□□□ 1.16
CSPG5-201ENST00000264723 OSBPL5Q9H0X9 879 aaPredicted RBP22.28■■□□□ 1.16
CSPG5-201ENST00000264723 QTRT2Q9H974 415 aaKnown RBP22.28■■□□□ 1.16
CSPG5-201ENST00000264723 TUBB4AP04350 444 aa22.28■■□□□ 1.16
CSPG5-201ENST00000264723 ZSCAN20P17040 1043 aaPredicted RBP22.28■■□□□ 1.16
CSPG5-201ENST00000264723 GBP3Q9H0R5 595 aa22.28■■□□□ 1.16
CSPG5-201ENST00000264723 FCHSD1Q86WN1 690 aa22.28■■□□□ 1.16
CSPG5-201ENST00000264723 CEP112Q8N8E3 955 aa22.28■■□□□ 1.16
CSPG5-201ENST00000264723 RNASE9P60153 205 aaKnown RBP22.27■■□□□ 1.16
CSPG5-201ENST00000264723 INF2Q27J81 1249 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 BTDP43251 543 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 FMR1Q06787 632 aaKnown RBP eCLIP22.27■■□□□ 1.16
CSPG5-201ENST00000264723 KRT79Q5XKE5 535 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 DYMQ7RTS9 669 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 LRRC47Q8N1G4 583 aaKnown RBP22.27■■□□□ 1.16
CSPG5-201ENST00000264723 PYM1Q9BRP8 204 aaKnown RBP22.27■■□□□ 1.16
CSPG5-201ENST00000264723 MINPP1Q9UNW1 487 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.27■■□□□ 1.16
CSPG5-201ENST00000264723 GSG1L2A8MUP6 293 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 CYP2D6P10635 497 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 PLCD1P51178 756 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 RAD51AP2Q09MP3 1159 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 MARCH10Q8NA82 808 aaPredicted RBP22.27■■□□□ 1.16
CSPG5-201ENST00000264723 WDR24Q96S15 920 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 RSPH14Q9UHP6 348 aa22.27■■□□□ 1.16
CSPG5-201ENST00000264723 CASP7P55210 303 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 PDE4DQ08499 809 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 CSGALNACT2Q8N6G5 542 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 ANKRD7Q92527 254 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 CCDC42Q96M95 316 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 FRMPD2Q68DX3 1309 aaPredicted RBP22.26■■□□□ 1.15
CSPG5-201ENST00000264723 MECOMQ03112 1051 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 SYCP1Q15431 976 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 CTR9Q6PD62 1173 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 RBM43Q6ZSC3 357 aaKnown RBP22.26■■□□□ 1.15
CSPG5-201ENST00000264723 BAZ2BQ9UIF8 2168 aaKnown RBP22.26■■□□□ 1.15
CSPG5-201ENST00000264723 CPVLQ9H3G5 476 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 ARPP21Q9UBL0 812 aaPredicted RBP22.26■■□□□ 1.15
CSPG5-201ENST00000264723 KDM6AO15550 1401 aaPredicted RBP22.26■■□□□ 1.15
CSPG5-201ENST00000264723 ZMYND10O75800 440 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 SERPINB2P05120 415 aa22.26■■□□□ 1.15
CSPG5-201ENST00000264723 WDR78Q5VTH9 848 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms