RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 TBX2Q13207 712 aaPredicted RBP18.27■□□□□ 0.52
SNCAIP-202ENST00000261368 CUL4BQ13620 913 aa18.27■□□□□ 0.52
SNCAIP-202ENST00000261368 KRT31Q15323 416 aa18.27■□□□□ 0.52
SNCAIP-202ENST00000261368 VGLL2Q8N8G2 317 aa18.27■□□□□ 0.52
SNCAIP-202ENST00000261368 GPKOWQ92917 476 aaPredicted RBP eCLIP18.27■□□□□ 0.52
SNCAIP-202ENST00000261368 CDHR2Q9BYE9 1310 aa18.27■□□□□ 0.52
SNCAIP-202ENST00000261368 CCDC194A0A1B0GVG4 234 aa18.27■□□□□ 0.51
SNCAIP-202ENST00000261368 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.51
SNCAIP-202ENST00000261368 ZSCAN26Q16670 478 aa18.27■□□□□ 0.51
SNCAIP-202ENST00000261368 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.51
SNCAIP-202ENST00000261368 UBA7P41226 1012 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 C10orf67Q8IYJ2 551 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 PANX2Q96RD6 677 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 CWC15Q9P013 229 aaKnown RBP18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 KCNJ18B7U540 433 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 KCNJ12Q14500 433 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 HDXQ7Z353 690 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 CCDC148Q8NFR7 591 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 FERMT2Q96AC1 680 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 MED15Q96RN5 788 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 TRIM34Q9BYJ4 488 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 WNT7AO00755 349 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 TRIM21P19474 475 aaKnown RBP18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 ABCB6Q9NP58 842 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 ZNHIT6Q9NWK9 470 aaKnown RBP18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 TFR2Q9UP52 801 aa18.26■□□□□ 0.51
SNCAIP-202ENST00000261368 ZMYND10O75800 440 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 STIM1Q13586 685 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 ZNF579Q8NAF0 562 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 GSDMAQ96QA5 445 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 TTF2Q9UNY4 1162 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 TRIM49BA6NDI0 452 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 MATR3P43243 847 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 COPB1P53618 953 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 ADGRA1Q86SQ6 560 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 TMTC1Q8IUR5 882 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 TRIM10Q9UDY6 481 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 ADD3Q9UEY8 706 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 BMP15O95972 392 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 ABL1P00519 1130 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 NAP1L1P55209 391 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 CCDC122Q5T0U0 273 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 CYP26C1Q6V0L0 522 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 KIFC2Q96AC6 838 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 LUC7L2Q9Y383 392 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 ABCC6O95255 1503 aa18.25■□□□□ 0.51
SNCAIP-202ENST00000261368 DNA2P51530 1060 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 ACBD3Q9H3P7 528 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 JADE2Q9NQC1 790 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 ADAM21Q9UKJ8 722 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 MST1RQ04912 1400 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 FAM237AA0A1B0GTK4 181 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 CCDC151A5D8V7 595 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 GYPCP04921 128 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 SARSP49591 514 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 HEATR3Q7Z4Q2 680 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 NAA15Q9BXJ9 866 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 SLAIN2Q9P270 581 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 STX8Q9UNK0 236 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 SPAG1Q07617 926 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 BRD3Q15059 726 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 NKX1-1Q15270 411 aaPredicted RBP18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 VAT1LQ9HCJ6 419 aa18.24■□□□□ 0.51
SNCAIP-202ENST00000261368 MACROD2A1Z1Q3 448 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 MTIF2P46199 727 aaKnown RBP18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 CHP1Q99653 195 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 FKBP15Q5T1M5 1219 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 ZNF512BQ96KM6 892 aaPredicted RBP18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 KAT14Q9H8E8 782 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 MCM9Q9NXL9 1143 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 FAN1Q9Y2M0 1017 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 POTEB2H3BUK9 544 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 SLC4A9Q96Q91 983 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 PNKPQ96T60 521 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 FUT8Q9BYC5 575 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 MKNK2Q9HBH9 465 aa18.23■□□□□ 0.51
SNCAIP-202ENST00000261368 N4BP1O75113 896 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 CCDC47Q96A33 483 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 PP2D1A8MPX8 630 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 SRGAP2O75044 1071 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 KCNQ4P56696 695 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 IRX5P78411 483 aaPredicted RBP18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 GBP3Q9H0R5 595 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 RBM28Q9NW13 759 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 TULP1O00294 542 aaPredicted RBP18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 RPN1P04843 607 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 CYP2D6P10635 497 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 USP5P45974 858 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 DPYDQ12882 1025 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 PSMB7Q99436 277 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 MYO6Q9UM54 1294 aa18.22■□□□□ 0.51
SNCAIP-202ENST00000261368 H3BQF6 201 aa18.21■□□□□ 0.51
SNCAIP-202ENST00000261368 VSNL1P62760 191 aa18.21■□□□□ 0.51
SNCAIP-202ENST00000261368 EVX2Q03828 476 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms