RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NUP88Q99567 741 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 FOXD4L1Q9NU39 408 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 RIMBP2O15034 1052 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 IFIT1P09914 478 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 MRPS9P82933 396 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 RABEP1Q15276 862 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 METTL24Q5JXM2 366 aa6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 DNAJC2Q99543 621 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-201ENST00000260810 SLC37A4O43826 429 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 HAPLN2Q9GZV7 340 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 CITO14578 2027 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 CYP3A7-CYP3A51PA0A087WV96 503 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 CASTP20810 708 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 SNAP25P60880 206 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 TMEM47Q9BQJ4 181 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 NPM3O75607 178 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 BBOX1O75936 387 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 FKBP1AP62942 108 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 KCTD19Q17RG1 926 aaPredicted RBP6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 MICAL3Q7RTP6 2002 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 PP2D1A8MPX8 630 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 STXBP3O00186 592 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 DDX58O95786 925 aaKnown RBP6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 HTRA3P83110 453 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 DNAJC5GQ8N7S2 189 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 RILPL2Q969X0 211 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 WDR18Q9BV38 432 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 KCNF1Q9H3M0 494 aa6.8□□□□□ -1.32
TOPBP1-201ENST00000260810 FAM189A1O60320 539 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 MKRN4PQ13434 485 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 IQCB1Q15051 598 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 ARSHQ5FYA8 562 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 TREML2Q5T2D2 321 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 STRIP1Q5VSL9 837 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 TPTE2Q6XPS3 522 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 BRF1Q92994 677 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 MTMR9Q96QG7 549 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 STRA6Q9BX79 667 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 MTMR4Q9NYA4 1195 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 NR1I2O75469 434 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 PTPN21Q16825 1174 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 TCTN1Q2MV58 587 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 CXorf38Q8TB03 319 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 PDLIM2Q96JY6 352 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 CNPY2Q9Y2B0 182 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 PPARAQ07869 468 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 DAW1Q8N136 415 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 CRACR2BQ8N4Y2 399 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 TCP11L1Q9NUJ3 509 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 ZMYM2Q9UBW7 1377 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 K7ELQ4 463 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 KIF23Q02241 960 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 ZBTB10Q96DT7 871 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 JMJD4Q9H9V9 463 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 PCDHB6Q9Y5E3 794 aa6.79□□□□□ -1.32
TOPBP1-201ENST00000260810 DOCK9Q9BZ29 2069 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 KIAA1549LQ6ZVL6 1849 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 USP17L5A8MUK1 530 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 LIFRP42702 1097 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 CCDC152Q4G0S7 254 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 FMR1NBQ8N0W7 255 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 FLRT1Q9NZU1 646 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 FBXO2Q9UK22 296 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 LEMD3Q9Y2U8 911 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 WDR19Q8NEZ3 1342 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 CFAP46Q8IYW2 2715 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 FAM86B1E9PN63 330 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 FAM86B2P0C5J1 330 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 HIBADHP31937 336 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 CRKP46108 304 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 CDK8P49336 464 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 DNM1Q05193 864 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 HHIPL2Q6UWX4 724 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 C2CD5Q86YS7 1000 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 CLASRPQ8N2M8 674 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 PRR29P0C7W0 189 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 CYP3A7P24462 503 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 CCDC57Q2TAC2 916 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 LDLRAD1Q5T700 205 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 E4F1Q66K89 784 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 USP17L2Q6R6M4 530 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 KIAA0825Q8IV33 1275 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 SHROOM3Q8TF72 1996 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 TNKSO95271 1327 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 ADM5C9JUS6 153 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 WWC2Q6AWC2 1192 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 RASGRP4Q8TDF6 673 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 RBSNQ9H1K0 784 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 GPRC5DQ9NZD1 345 aa6.78□□□□□ -1.32
TOPBP1-201ENST00000260810 KDM4AO75164 1064 aa6.77□□□□□ -1.32
TOPBP1-201ENST00000260810 UFL1O94874 794 aa6.77□□□□□ -1.32
TOPBP1-201ENST00000260810 GOLGA8HP0CJ92 632 aa6.77□□□□□ -1.32
TOPBP1-201ENST00000260810 XRCC6P12956 609 aaKnown RBP eCLIP6.77□□□□□ -1.32
TOPBP1-201ENST00000260810 BTDP43251 543 aa6.77□□□□□ -1.32
TOPBP1-201ENST00000260810 MFSD14BQ5SR56 506 aa6.77□□□□□ -1.32
TOPBP1-201ENST00000260810 RSBN1LQ6PCB5 846 aaPredicted RBP6.77□□□□□ -1.32
TOPBP1-201ENST00000260810 ETNPPLQ8TBG4 499 aa6.77□□□□□ -1.32
TOPBP1-201ENST00000260810 VOPP1Q96AW1 172 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms