RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 VCPKMTQ9H867 229 aa26.82■■□□□ 1.88
APOE-201ENST00000252486 TNKSO95271 1327 aa26.82■■□□□ 1.88
APOE-201ENST00000252486 PRC1O43663 620 aa26.81■■□□□ 1.88
APOE-201ENST00000252486 BLOC1S2Q6QNY1 142 aa26.81■■□□□ 1.88
APOE-201ENST00000252486 GADL1Q6ZQY3 521 aa26.81■■□□□ 1.88
APOE-201ENST00000252486 DHX32Q7L7V1 743 aaKnown RBP26.81■■□□□ 1.88
APOE-201ENST00000252486 BRI3BPQ8WY22 251 aa26.81■■□□□ 1.88
APOE-201ENST00000252486 ZKSCAN3Q9BRR0 538 aa26.81■■□□□ 1.88
APOE-201ENST00000252486 ZCCHC17Q9NP64 241 aaKnown RBP26.81■■□□□ 1.88
APOE-201ENST00000252486 MYH4Q9Y623 1939 aa26.8■■□□□ 1.88
APOE-201ENST00000252486 LOC285556D6RIA3 1793 aa26.8■■□□□ 1.88
APOE-201ENST00000252486 IFIT3O14879 490 aaKnown RBP26.8■■□□□ 1.88
APOE-201ENST00000252486 PABPC4Q13310 644 aaKnown RBP eCLIP26.8■■□□□ 1.885e-7■■■■■ 72.5
APOE-201ENST00000252486 ENAHQ8N8S7 591 aaPredicted RBP26.8■■□□□ 1.88
APOE-201ENST00000252486 GMCL1P1Q8NEA9 526 aa26.8■■□□□ 1.88
APOE-201ENST00000252486 IL17RAQ96F46 866 aa26.8■■□□□ 1.88
APOE-201ENST00000252486 EMILIN3Q9NT22 766 aa26.8■■□□□ 1.88
APOE-201ENST00000252486 ANTXR2P58335 489 aa26.79■■□□□ 1.88
APOE-201ENST00000252486 ZYXQ15942 572 aaKnown RBP26.79■■□□□ 1.88
APOE-201ENST00000252486 IFIT1BQ5T764 474 aaKnown RBP26.79■■□□□ 1.88
APOE-201ENST00000252486 RCSD1Q6JBY9 416 aa26.79■■□□□ 1.88
APOE-201ENST00000252486 ANKRD23Q86SG2 305 aa26.79■■□□□ 1.88
APOE-201ENST00000252486 TMTC2Q8N394 836 aa26.79■■□□□ 1.88
APOE-201ENST00000252486 C22orf23Q9BZE7 217 aa26.79■■□□□ 1.88
APOE-201ENST00000252486 AGTPBP1Q9UPW5 1226 aa26.79■■□□□ 1.88
APOE-201ENST00000252486 SLC45A1Q9Y2W3 748 aa26.79■■□□□ 1.88
APOE-201ENST00000252486 MOGSQ13724 837 aa26.78■■□□□ 1.88
APOE-201ENST00000252486 WTAPQ15007 396 aa26.78■■□□□ 1.88
APOE-201ENST00000252486 SEC23AQ15436 765 aa26.78■■□□□ 1.88
APOE-201ENST00000252486 TMEM67Q5HYA8 995 aa26.78■■□□□ 1.88
APOE-201ENST00000252486 ZIC5Q96T25 663 aa26.78■■□□□ 1.88
APOE-201ENST00000252486 TMEM47Q9BQJ4 181 aa26.78■■□□□ 1.88
APOE-201ENST00000252486 KAT14Q9H8E8 782 aa26.78■■□□□ 1.88
APOE-201ENST00000252486 F5H6K3 240 aa26.77■■□□□ 1.88
APOE-201ENST00000252486 ALDH1A1P00352 501 aa26.77■■□□□ 1.88
APOE-201ENST00000252486 CASTP20810 708 aaKnown RBP26.77■■□□□ 1.88
APOE-201ENST00000252486 RBM25P49756 843 aaKnown RBP26.77■■□□□ 1.88
APOE-201ENST00000252486 EXOSC10Q01780 885 aaKnown RBP26.77■■□□□ 1.88
APOE-201ENST00000252486 KLRC3Q07444 240 aa26.77■■□□□ 1.88
APOE-201ENST00000252486 IFNL1Q8IU54 200 aa26.77■■□□□ 1.88
APOE-201ENST00000252486 LRRC47Q8N1G4 583 aaKnown RBP26.77■■□□□ 1.88
APOE-201ENST00000252486 CYP46A1Q9Y6A2 500 aa26.77■■□□□ 1.88
APOE-201ENST00000252486 BTBD19C9JJ37 291 aa26.76■■□□□ 1.87
APOE-201ENST00000252486 WDR46O15213 610 aaKnown RBP26.76■■□□□ 1.87
APOE-201ENST00000252486 RPS6KB1P23443 525 aa26.76■■□□□ 1.87
APOE-201ENST00000252486 MAP2K1Q02750 393 aaPredicted RBP26.76■■□□□ 1.87
APOE-201ENST00000252486 CHST3Q7LGC8 479 aa26.76■■□□□ 1.87
APOE-201ENST00000252486 IGDCC4Q8TDY8 1250 aa26.76■■□□□ 1.87
APOE-201ENST00000252486 ZSWIM6Q9HCJ5 1215 aa26.76■■□□□ 1.87
APOE-201ENST00000252486 NDUFB10O96000 172 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 VCAM1P19320 739 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 LIFRP42702 1097 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 SLFN13Q68D06 897 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 GPAT2Q6NUI2 795 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 RUFY3Q7L099 469 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 GMCL1Q96IK5 515 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 PTPN18Q99952 460 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 PNMA3Q9UL41 463 aa26.75■■□□□ 1.87
APOE-201ENST00000252486 RAD21O60216 631 aa26.74■■□□□ 1.87
APOE-201ENST00000252486 HOXA7P31268 230 aaPredicted RBP26.74■■□□□ 1.87
APOE-201ENST00000252486 PNMA1Q8ND90 353 aa26.74■■□□□ 1.87
APOE-201ENST00000252486 USP17L15C9J2P7 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 USP17L13C9JLJ4 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 USP17L11C9JVI0 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 USP17L18D6R9N7 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 USP17L22D6RA61 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 USP17L17D6RBQ6 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 USP17L19D6RCP7 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 USP17L20D6RJB6 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 IGF2BP3O00425 579 aaKnown RBP eCLIP26.73■■□□□ 1.87
APOE-201ENST00000252486 SH2B2O14492 632 aaPredicted RBP26.73■■□□□ 1.87
APOE-201ENST00000252486 FGD1P98174 961 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 USP17L24Q0WX57 530 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 DCAF4Q8WV16 495 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 LY9Q9HBG7 655 aa26.73■■□□□ 1.87
APOE-201ENST00000252486 PDHXO00330 501 aa26.72■■□□□ 1.87
APOE-201ENST00000252486 OSBPP22059 807 aa26.72■■□□□ 1.87
APOE-201ENST00000252486 DGKZQ13574 1117 aa26.72■■□□□ 1.87
APOE-201ENST00000252486 TREML2Q5T2D2 321 aa26.72■■□□□ 1.87
APOE-201ENST00000252486 SPICE1Q8N0Z3 855 aa26.72■■□□□ 1.87
APOE-201ENST00000252486 FBXL16Q8N461 479 aa26.72■■□□□ 1.87
APOE-201ENST00000252486 JMYQ8N9B5 988 aa26.72■■□□□ 1.87
APOE-201ENST00000252486 RPAP3Q9H6T3 665 aaPredicted RBP26.72■■□□□ 1.87
APOE-201ENST00000252486 COL9A3Q14050 684 aaPredicted RBP26.71■■□□□ 1.87
APOE-201ENST00000252486 KIAA1755Q5JYT7 1200 aa26.71■■□□□ 1.87
APOE-201ENST00000252486 CATIPQ7Z7H3 387 aa26.71■■□□□ 1.87
APOE-201ENST00000252486 FAM43AQ8N2R8 423 aa26.71■■□□□ 1.87
APOE-201ENST00000252486 TBC1D32Q96NH3 1257 aa26.71■■□□□ 1.87
APOE-201ENST00000252486 BEGAINQ9BUH8 593 aa26.71■■□□□ 1.87
APOE-201ENST00000252486 CCDC69A6NI79 296 aa26.7■■□□□ 1.86
APOE-201ENST00000252486 CA12O43570 354 aa26.7■■□□□ 1.86
APOE-201ENST00000252486 BMP3P12645 472 aa26.7■■□□□ 1.86
APOE-201ENST00000252486 SLC1A4P43007 532 aa26.7■■□□□ 1.86
APOE-201ENST00000252486 IRX3P78415 501 aaPredicted RBP26.7■■□□□ 1.86
APOE-201ENST00000252486 NFXL1Q6ZNB6 911 aa26.7■■□□□ 1.86
APOE-201ENST00000252486 CATSPERGQ6ZRH7 1159 aa26.7■■□□□ 1.86
APOE-201ENST00000252486 SGMS1Q86VZ5 419 aa26.7■■□□□ 1.86
APOE-201ENST00000252486 IL27Q8NEV9 243 aa26.7■■□□□ 1.86
APOE-201ENST00000252486 PARK7Q99497 189 aaKnown RBP26.7■■□□□ 1.86
APOE-201ENST00000252486 LRRC2Q9BYS8 371 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 356.2 ms