RNA–Protein interactions for RNA: ENST00000250113.11

FXR2-201, Transcript of FMR1 autosomal homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXR2, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-201ENST00000250113 XPO4Q9C0E2 1151 aaKnown RBP22.34■■□□□ 1.17
FXR2-201ENST00000250113 NCAPHQ15003 741 aa22.33■■□□□ 1.17
FXR2-201ENST00000250113 TUBE1Q9UJT0 475 aa22.33■■□□□ 1.17
FXR2-201ENST00000250113 ATP2B4P23634 1241 aa22.33■■□□□ 1.16
FXR2-201ENST00000250113 GTF2IP78347 998 aa22.33■■□□□ 1.16
FXR2-201ENST00000250113 TEX11Q8IYF3 940 aa22.33■■□□□ 1.16
FXR2-201ENST00000250113 SRPRBQ9Y5M8 271 aaKnown RBP22.33■■□□□ 1.16
FXR2-201ENST00000250113 MYH6P13533 1939 aa22.33■■□□□ 1.16
FXR2-201ENST00000250113 SCG2P13521 617 aa22.32■■□□□ 1.16
FXR2-201ENST00000250113 BMP6P22004 513 aa22.32■■□□□ 1.16
FXR2-201ENST00000250113 CASP1P29466 404 aa22.32■■□□□ 1.16
FXR2-201ENST00000250113 MXD3Q9BW11 206 aa22.32■■□□□ 1.16
FXR2-201ENST00000250113 FAM237AA0A1B0GTK4 181 aa22.32■■□□□ 1.16
FXR2-201ENST00000250113 AMOTL1Q8IY63 956 aa22.32■■□□□ 1.16
FXR2-201ENST00000250113 RASGRP4Q8TDF6 673 aa22.32■■□□□ 1.16
FXR2-201ENST00000250113 DHX58Q96C10 678 aa22.32■■□□□ 1.16
FXR2-201ENST00000250113 CCDC88AQ3V6T2 1871 aa22.31■■□□□ 1.16
FXR2-201ENST00000250113 BBOX1O75936 387 aa22.31■■□□□ 1.16
FXR2-201ENST00000250113 LDHCP07864 332 aa22.31■■□□□ 1.16
FXR2-201ENST00000250113 SLC27A3Q5K4L6 730 aa22.31■■□□□ 1.16
FXR2-201ENST00000250113 TMC6Q7Z403 805 aa22.31■■□□□ 1.16
FXR2-201ENST00000250113 BRMS1Q9HCU9 246 aa22.31■■□□□ 1.16
FXR2-201ENST00000250113 CEP131Q9UPN4 1083 aa22.31■■□□□ 1.16
FXR2-201ENST00000250113 A0A087X0B3 334 aa22.31■■□□□ 1.16
FXR2-201ENST00000250113 CDC25BP30305 580 aa22.3■■□□□ 1.16
FXR2-201ENST00000250113 AFMP43652 599 aa22.3■■□□□ 1.16
FXR2-201ENST00000250113 MDM2Q00987 491 aaPredicted RBP22.3■■□□□ 1.16
FXR2-201ENST00000250113 VWA3AA6NCI4 1184 aa22.3■■□□□ 1.16
FXR2-201ENST00000250113 MCM7P33993 719 aa22.3■■□□□ 1.16
FXR2-201ENST00000250113 PICALMQ13492 652 aa22.3■■□□□ 1.16
FXR2-201ENST00000250113 POSTNQ15063 836 aa22.3■■□□□ 1.16
FXR2-201ENST00000250113 STAMQ92783 540 aa22.3■■□□□ 1.16
FXR2-201ENST00000250113 IL1R1P14778 569 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 PPP4CP60510 307 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 PKNOX2Q96KN3 472 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 HSD3B7Q9H2F3 369 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 RASA1P20936 1047 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 PTGDRQ13258 359 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 PFKFB3Q16875 520 aaPredicted RBP22.29■■□□□ 1.16
FXR2-201ENST00000250113 DOK7Q18PE1 504 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 TTC38Q5R3I4 469 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 KIF5BP33176 963 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 MSL1Q68DK7 614 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 TNFRSF25Q93038 417 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 BPIFA3Q9BQP9 254 aa22.29■■□□□ 1.16
FXR2-201ENST00000250113 SLC35G1Q2M3R5 365 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 TYW1BQ6NUM6 668 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 DPF2Q92785 391 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 SYMPKQ92797 1274 aaKnown RBP22.28■■□□□ 1.16
FXR2-201ENST00000250113 TMEM47Q9BQJ4 181 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 PPEF1O14829 653 aaPredicted RBP22.28■■□□□ 1.16
FXR2-201ENST00000250113 CDK8P49336 464 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 CCZ1BP86790 482 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 CCZ1P86791 482 aaPredicted RBP22.28■■□□□ 1.16
FXR2-201ENST00000250113 DGKHQ86XP1 1220 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 FANCLQ9NW38 375 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 MAN1B1Q9UKM7 699 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 UBR3Q6ZT12 1888 aa22.28■■□□□ 1.16
FXR2-201ENST00000250113 SMTNL1A8MU46 457 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 PDCL2Q8N4E4 241 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 MAD2L2Q9UI95 211 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 KIAA1551Q9HCM1 1747 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 GPR75-ASB3A0A0A6YYF3 556 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 CDC25AP30304 524 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 FANCCQ00597 558 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 CEP135Q66GS9 1140 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 C15orf52Q6ZUT6 534 aaKnown RBP22.27■■□□□ 1.16
FXR2-201ENST00000250113 TRMT44Q8IYL2 757 aaKnown RBP22.27■■□□□ 1.16
FXR2-201ENST00000250113 EYA3Q99504 573 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 TMX1Q9H3N1 280 aa22.27■■□□□ 1.16
FXR2-201ENST00000250113 FLT1P17948 1338 aa22.27■■□□□ 1.15
FXR2-201ENST00000250113 COL23A1Q86Y22 540 aaPredicted RBP22.26■■□□□ 1.15
FXR2-201ENST00000250113 ACTN4O43707 911 aaKnown RBP22.26■■□□□ 1.15
FXR2-201ENST00000250113 CYTH3O43739 400 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 HOXA10P31260 410 aaPredicted RBP22.26■■□□□ 1.15
FXR2-201ENST00000250113 GTF2F1P35269 517 aaKnown RBP eCLIP22.26■■□□□ 1.15
FXR2-201ENST00000250113 RHBDL3P58872 404 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 TPM4P67936 248 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 NCBP1Q09161 790 aaKnown RBP22.26■■□□□ 1.15
FXR2-201ENST00000250113 HEATR3Q7Z4Q2 680 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 VAT1LQ9HCJ6 419 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 FAM205AQ6ZU69 1335 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 SERPINC1P01008 464 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 SCNN1DP51172 638 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 MYL5Q02045 173 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 SMARCE1Q969G3 411 aa22.26■■□□□ 1.15
FXR2-201ENST00000250113 HOMER1Q86YM7 354 aa22.25■■□□□ 1.15
FXR2-201ENST00000250113 ZNF579Q8NAF0 562 aaKnown RBP22.25■■□□□ 1.15
FXR2-201ENST00000250113 ZNF219Q9P2Y4 722 aaPredicted RBP22.25■■□□□ 1.15
FXR2-201ENST00000250113 ARMCX5Q6P1M9 558 aa22.25■■□□□ 1.15
FXR2-201ENST00000250113 USP17L2Q6R6M4 530 aa22.25■■□□□ 1.15
FXR2-201ENST00000250113 SLURP2P0DP57 97 aa22.24■■□□□ 1.15
FXR2-201ENST00000250113 EIF6P56537 245 aaKnown RBP22.24■■□□□ 1.15
FXR2-201ENST00000250113 CRAMP1Q96RY5 1269 aa22.24■■□□□ 1.15
FXR2-201ENST00000250113 PODXL2Q9NZ53 605 aa22.24■■□□□ 1.15
FXR2-201ENST00000250113 HOOK1Q9UJC3 728 aaKnown RBP22.24■■□□□ 1.15
FXR2-201ENST00000250113 APBA3O96018 575 aa22.24■■□□□ 1.15
FXR2-201ENST00000250113 FMR1Q06787 632 aaKnown RBP eCLIP22.24■■□□□ 1.152e-6■■□□□ 11.9
FXR2-201ENST00000250113 CCDC94Q9BW85 323 aaPredicted RBP22.24■■□□□ 1.15
FXR2-201ENST00000250113 DAGLAQ9Y4D2 1042 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms