RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ENAHQ8N8S7 591 aaPredicted RBP19.63■□□□□ 0.73
USB1-201ENST00000219281 WTIPA6NIX2 430 aaPredicted RBP19.62■□□□□ 0.73
USB1-201ENST00000219281 ZNF174Q15697 407 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 NOM1Q5C9Z4 860 aaKnown RBP19.62■□□□□ 0.73
USB1-201ENST00000219281 TAF3Q5VWG9 929 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 ZSCAN10Q96SZ4 725 aaPredicted RBP19.62■□□□□ 0.73
USB1-201ENST00000219281 ANAPC4Q9UJX5 808 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 USP21Q9UK80 565 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 CNTNAP4Q9C0A0 1308 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 BCORQ6W2J9 1755 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 CYP2D7A0A087X1C5 515 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 A0A0U1RQJ8 604 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 PRPF3O43395 683 aaKnown RBP19.62■□□□□ 0.73
USB1-201ENST00000219281 SASH3O75995 380 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 TBC1D8O95759 1140 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 FAM193AP78312 1265 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 FUT2Q10981 343 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 DPYDQ12882 1025 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 PPP2R5BQ15173 497 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 CT47A1Q5JQC4 288 aaPredicted RBP19.62■□□□□ 0.73
USB1-201ENST00000219281 TBC1D9BQ66K14 1250 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 ATRIPQ8WXE1 791 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 PARD6BQ9BYG5 372 aa19.62■□□□□ 0.73
USB1-201ENST00000219281 ADD3Q9UEY8 706 aaKnown RBP19.62■□□□□ 0.73
USB1-201ENST00000219281 POLR3GO15318 223 aaPredicted RBP19.61■□□□□ 0.73
USB1-201ENST00000219281 IFIT1BQ5T764 474 aaKnown RBP19.61■□□□□ 0.73
USB1-201ENST00000219281 CDKAL1Q5VV42 579 aa19.61■□□□□ 0.73
USB1-201ENST00000219281 BICDL1Q6ZP65 573 aa19.61■□□□□ 0.73
USB1-201ENST00000219281 STAMQ92783 540 aa19.61■□□□□ 0.73
USB1-201ENST00000219281 ADGRG1Q9Y653 693 aa19.61■□□□□ 0.73
USB1-201ENST00000219281 PPP1R3GB7ZBB8 358 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 ATP8B1O43520 1251 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 COBLO75128 1261 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 PBX1P40424 430 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 SF3B3Q15393 1217 aaKnown RBP19.6■□□□□ 0.73
USB1-201ENST00000219281 CATIPQ7Z7H3 387 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 GOLGA1Q92805 767 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 ZNF831Q5JPB2 1677 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 AMIGO3Q86WK7 504 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 CREBRFQ8IUR6 639 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 RABGGTAQ92696 567 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 FERMT2Q96AC1 680 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 GSDMAQ96QA5 445 aa19.6■□□□□ 0.73
USB1-201ENST00000219281 NAA15Q9BXJ9 866 aaKnown RBP19.6■□□□□ 0.73
USB1-201ENST00000219281 CCDC66A2RUB6 948 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 DYNLL1P63167 89 aaKnown RBP19.59■□□□□ 0.73
USB1-201ENST00000219281 FILIP1LQ4L180 1135 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 CTAGE1Q96RT6 745 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 ZSWIM4Q9H7M6 989 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 SRP68Q9UHB9 627 aaKnown RBP19.59■□□□□ 0.73
USB1-201ENST00000219281 MFAP3LO75121 409 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 CASP14P31944 242 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 GYG1P46976 350 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 RIOK1Q9BRS2 568 aaKnown RBP19.59■□□□□ 0.73
USB1-201ENST00000219281 BRMS1Q9HCU9 246 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 CTNND2Q9UQB3 1225 aa19.59■□□□□ 0.73
USB1-201ENST00000219281 RPS6KA4O75676 772 aa19.58■□□□□ 0.73
USB1-201ENST00000219281 CYP2C19P33261 490 aa19.58■□□□□ 0.73
USB1-201ENST00000219281 TTC38Q5R3I4 469 aa19.58■□□□□ 0.73
USB1-201ENST00000219281 RC3H1Q5TC82 1133 aaKnown RBP19.58■□□□□ 0.73
USB1-201ENST00000219281 BMP15O95972 392 aa19.58■□□□□ 0.72
USB1-201ENST00000219281 CDC5LQ99459 802 aaKnown RBP19.58■□□□□ 0.72
USB1-201ENST00000219281 BLZF1Q9H2G9 400 aa19.58■□□□□ 0.72
USB1-201ENST00000219281 ARFGAP3Q9NP61 516 aa19.58■□□□□ 0.72
USB1-201ENST00000219281 RBM28Q9NW13 759 aaKnown RBP19.58■□□□□ 0.72
USB1-201ENST00000219281 TXLNAP40222 546 aa19.57■□□□□ 0.72
USB1-201ENST00000219281 CCT6AP40227 531 aaKnown RBP19.57■□□□□ 0.72
USB1-201ENST00000219281 PTGDRQ13258 359 aa19.57■□□□□ 0.72
USB1-201ENST00000219281 SLC10A5Q5PT55 438 aa19.57■□□□□ 0.72
USB1-201ENST00000219281 TNFRSF25Q93038 417 aa19.57■□□□□ 0.72
USB1-201ENST00000219281 UBXN6Q9BZV1 441 aa19.57■□□□□ 0.72
USB1-201ENST00000219281 NARFQ9UHQ1 456 aa19.57■□□□□ 0.72
USB1-201ENST00000219281 SEMA3EO15041 775 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 KIF5CO60282 957 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 FXR1P51114 621 aaKnown RBP eCLIP19.56■□□□□ 0.72
USB1-201ENST00000219281 TROAPQ12815 778 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 NPY5RQ15761 445 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 IQCA1Q86XH1 822 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.56■□□□□ 0.72
USB1-201ENST00000219281 XDHP47989 1333 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 GYPCP04921 128 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 CHMP4BP1P59074 171 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 ZNF569Q5MCW4 686 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 RASGRP2Q7LDG7 609 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 ANKRD18AQ8IVF6 992 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 CELF1Q92879 486 aaKnown RBP19.56■□□□□ 0.72
USB1-201ENST00000219281 ZCCHC17Q9NP64 241 aaKnown RBP19.56■□□□□ 0.72
USB1-201ENST00000219281 BSDC1Q9NW68 430 aaPredicted RBP19.56■□□□□ 0.72
USB1-201ENST00000219281 PUF60Q9UHX1 559 aaKnown RBP19.56■□□□□ 0.72
USB1-201ENST00000219281 LAMB2P55268 1798 aa19.56■□□□□ 0.72
USB1-201ENST00000219281 TAF1P21675 1872 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 OAS2P29728 719 aaKnown RBP19.55■□□□□ 0.72
USB1-201ENST00000219281 ATP2C1P98194 919 aaPredicted RBP19.55■□□□□ 0.72
USB1-201ENST00000219281 SMC1AQ14683 1233 aaKnown RBP19.55■□□□□ 0.72
USB1-201ENST00000219281 RRAGBQ5VZM2 374 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 TMTC3Q6ZXV5 915 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 SRGAP1Q7Z6B7 1085 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 MINPP1Q9UNW1 487 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 MYH6P13533 1939 aa19.55■□□□□ 0.72
USB1-201ENST00000219281 RGL2O15211 777 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms