RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 CUTAO60888 179 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 MARSP56192 900 aaKnown RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 CKAP4Q07065 602 aaKnown RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 VPS72Q15906 364 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 CERKLQ49MI3 558 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 KIF18AQ8NI77 898 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.76□□□□□ -1.65
CFTR-201ENST00000003084 SPAG5Q96R06 1193 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ZKSCAN3Q9BRR0 538 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 C1orf167Q5SNV9 1468 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PNMA6EA0A0J9YXQ4 647 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PABPN1LA6NDY0 278 aaKnown RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 H0YCG3 227 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 BIN1O00499 593 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ZEB2O60315 1214 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ARL4DP49703 201 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ZNF165P49910 485 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 TFAP4Q01664 338 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 KIF4BQ2VIQ3 1234 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 LETM2Q2VYF4 491 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PDCL2Q8N4E4 241 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 CTNNBL1Q8WYA6 563 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 PIGBQ92521 554 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 SELENOOQ9BVL4 669 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 DBR1Q9UK59 544 aaKnown RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 RABGAP1Q9Y3P9 1069 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 GOLGA6L7A0A1B0GV03 622 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PDE8BO95263 885 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 POLR2MP0CAP2 368 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ACTN2P35609 894 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ATN1P54259 1190 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 KRT83P78385 493 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PPP2R5EQ16537 467 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 VWA3BQ502W6 1294 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 CCDC117Q8IWD4 279 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 SLFN12Q8IYM2 578 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 IFNL3Q8IZI9 196 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 NEK11Q8NG66 645 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 KLHDC4Q8TBB5 520 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 SMCR8Q8TEV9 937 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 DHX36Q9H2U1 1008 aaKnown RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 GDPD2Q9HCC8 539 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 BSDC1Q9NW68 430 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 RASAL2Q9UJF2 1139 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ARHGEF35A5YM69 484 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 MYCLP12524 364 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 MARCKSP29966 332 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 UBASH3AP57075 661 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 TCP10Q12799 353 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 TTC38Q5R3I4 469 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 CHST3Q7LGC8 479 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 USP33Q8TEY7 942 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 TSNARE1Q96NA8 513 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 FAM193BQ96PV7 902 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 TSGA10Q9BZW7 698 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 COA1Q9GZY4 146 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PIM2Q9P1W9 311 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 MRVI1Q9Y6F6 885 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 V9GY48 417 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 CARMIL3Q8ND23 1372 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 E7EWF7 191 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 SLC8A3P57103 927 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 TRIM14Q14142 442 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ZNF174Q15697 407 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 TAF12Q16514 161 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ZSCAN23Q3MJ62 389 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ARHGEF16Q5VV41 709 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 GADL1Q6ZQY3 521 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PIK3AP1Q6ZUJ8 805 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 KRT26Q7Z3Y9 468 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 TTLL6Q8N841 843 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ZNF274Q96GC6 653 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 GJD4Q96KN9 370 aaPredicted RBP4.76□□□□□ -1.65
CFTR-201ENST00000003084 USP44Q9H0E7 712 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 NT5C3AQ9H0P0 336 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 MMRN2Q9H8L6 949 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 WWC3Q9ULE0 1092 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ZBTB21Q9ULJ3 1066 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 ZBTB1Q9Y2K1 713 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 PTPRMP28827 1452 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 DIP2BQ9P265 1576 aa4.76□□□□□ -1.65
CFTR-201ENST00000003084 TCP10L2B9ZVM9 353 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 ZNF853P0CG23 659 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 BCAMP50895 628 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 PDE4DQ08499 809 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 CALCRLQ16602 461 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 ZSCAN30Q86W11 494 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 NLRP10Q86W26 655 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 EXOC8Q8IYI6 725 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 UBXN4Q92575 508 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 GREM2Q9H772 168 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 NARFQ9UHQ1 456 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 RIMS1Q86UR5 1692 aaKnown RBP4.75□□□□□ -1.65
CFTR-201ENST00000003084 CDHR2Q9BYE9 1310 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 TMCO5BA8MYB1 307 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 PDE6AP16499 860 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 NOP2P46087 812 aaKnown RBP4.75□□□□□ -1.65
CFTR-201ENST00000003084 LMAN1P49257 510 aa4.75□□□□□ -1.65
CFTR-201ENST00000003084 YWHAEP62258 255 aaKnown RBP4.75□□□□□ -1.65
CFTR-201ENST00000003084 PTK2Q05397 1052 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms