RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Pcdhb15Q91Y04 786 aa16.38■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Tjap1Q9DCD5 539 aa16.38■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Syt10Q9R0N4 523 aa16.38■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Igsf9bE9PZ19 1328 aa16.38■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ppef2O35385 757 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 LdhaP06151 332 aaKnown RBP16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Cdk4P30285 303 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Cdkn1cP49919 348 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 CebpzP53569 1052 aaKnown RBP16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Fam89aQ14BJ1 175 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Nsrp1Q5NCR9 542 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Myo19Q5SV80 963 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 WaplQ65Z40 1200 aaKnown RBP16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ints4Q8CIM8 964 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Etnk1Q9D4V0 363 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Dusp10Q9ESS0 483 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Clic4Q9QYB1 253 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Zbtb21E9Q444 1094 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ampd3O08739 766 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Tbc1d9bQ5SVR0 1263 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Glra4Q61603 456 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ano10Q8BH79 659 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Dnaaf2Q8BPI1 814 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Sec62Q8BU14 398 aaKnown RBP16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ttll1Q91V51 423 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Irx4Q9QY61 515 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 NinQ61043 2035 aa16.37■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Myh7bA2AQP0 1941 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 GabreA2AMW3 916 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 A430078G23RikE9Q7Y4 484 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Tpd52l1O54818 204 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Rps12P63323 132 aaKnown RBP16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Atp1a3Q6PIC6 1013 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ccdc93Q7TQK5 629 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ccp110Q7TSH4 1004 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 CrebrfQ8CDG5 640 aaKnown RBP16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Atxn7Q8R4I1 867 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Tspyl4Q8VD63 406 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Tmem79Q9D709 391 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Kcnq2Q9Z351 759 aa16.36■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Mageb2A2AHM0 380 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Sema3fO88632 785 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Sptlc2P97363 560 aaKnown RBP16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 MycbpapQ5SUV2 932 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Brip1Q5SXJ3 1174 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Grm4Q68EF4 912 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 B4galnt4Q766D5 1034 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Galnt17Q7TT15 598 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 IqcgQ80W32 419 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Lrrc15Q80X72 579 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Rasgrp4Q8BTM9 673 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Dnaaf4Q8R368 420 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Lonrf3Q9D4H7 753 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Mei1Q9D4I2 1268 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Tgm5Q9D7I9 724 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Atrnl1Q6A051 1378 aa16.35■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Mybl2P48972 704 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Zc3h15Q3TIV5 426 aaKnown RBP16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Kmt5bQ3U8K7 883 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Armc2Q3URY6 854 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 PRAG1Q571I4 1179 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Dhx40Q6PE54 779 aaKnown RBP16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ift74Q8BKE9 600 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Kiaa1524Q8BWY9 907 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Hnrnpul1Q8VDM6 859 aaKnown RBP16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Gbp7Q91Z40 638 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ndfip2Q91ZP6 311 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Tlcd1Q99JT6 247 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Tfcp2Q9ERA0 502 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Psmd10Q9Z2X2 231 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Gm5114W4VSN8 858 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Gm43638A0A0J9YU36 694 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Prss51A0A286YDY8 319 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Pramel3A2AHA7 463 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Gm7903A2AWL1 463 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 AV320801A2AWL3 467 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Gm15023L7MUB4 467 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 MsnP26041 577 aaKnown RBP16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Mars2Q499X9 586 aaKnown RBP16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Pknox2Q8BG99 474 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Nrbp1Q99J45 535 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Ifi35Q9D8C4 286 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Mical3Q8CJ19 1993 aa16.34■□□□□ 0.21
Ssr1-204ENSMUST00000225319 Glt1d1A4FUP9 346 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Atp2b1G5E829 1220 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Sema3eP70275 775 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Map9Q3TRR0 646 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Cyp4x1Q6A152 507 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Ano6Q6P9J9 911 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 LdhdQ7TNG8 484 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Slu7Q8BHJ9 585 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Q8BZJ8 459 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Kbtbd13Q8C828 458 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Kcnk13Q8R1P5 405 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Apbb1ipQ8R5A3 670 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Cd2apQ9JLQ0 637 aa16.33■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Cyp2c69E9PXC3 491 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Rad23bP54728 416 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 Cyp2c40P56657 491 aa16.32■□□□□ 0.2
Ssr1-204ENSMUST00000225319 DSCC1Q14AI0 399 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms