RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 Pdzrn3Q69ZS0 1063 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Snd1Q78PY7 910 aaKnown RBP7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Tti2Q8BGV4 512 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 RarsQ9D0I9 660 aaKnown RBP7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Tnip3A0A1D5RMN0 279 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 C1qbpO35658 278 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 EsrrgP62509 458 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Pfdn6Q03958 127 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Gm5168Q4KL04 211 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Zbtb41Q811F1 908 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Cyp4f39Q8BGU0 532 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ufl1Q8CCJ3 793 aaKnown RBP7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Med1Q925J9 1575 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Gbp4A4UUI3 631 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ercc5P35689 1170 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Csrnp2Q8BGQ2 534 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ppp1r3fQ9JIG4 799 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 IghaA0A0A6YXW6 389 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Tyro3P55144 880 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Kdm1aQ6ZQ88 853 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Pja2Q80U04 707 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Nup58Q8R332 587 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Cnot6lQ8VEG6 555 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Psrc1Q9D0P7 329 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ift172Q6VH22 1749 aa7.11□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Aox1O54754 1333 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Arhgap4B1AUY3 965 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ube4aE9Q735 1028 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Mdm2P23804 489 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ftl2P49945 183 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Trim71Q1PSW8 855 aaKnown RBP7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Map3k10Q66L42 940 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ptcd1Q8C2E4 695 aaKnown RBP7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Thap12Q9CUX1 758 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Slx4ipQ9D7Y9 413 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Chd2E9PZM4 1827 aaKnown RBP7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Tubgcp6G5E8P0 1769 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Kif20bQ80WE4 1774 aaKnown RBP7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Mon2Q80TL7 1715 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Topaz1E5FYH1 1653 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Slc1a4O35874 532 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Slc4a4O88343 1079 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ca8P28651 291 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Cct2P80314 535 aaKnown RBP7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Sun3Q5SS91 320 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Adora1Q60612 326 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Sh3gl3Q62421 347 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Miga2Q8BK03 593 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Daam1Q8BPM0 1077 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Taf5lQ91WQ5 589 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Xrcc4Q924T3 326 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ube3bQ9ES34 1070 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 PalmdQ9JHU2 551 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Unc13bQ9Z1N9 1602 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Stk10O55098 966 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 YwhaeP62259 255 aaKnown RBP7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Glg1Q61543 1175 aaKnown RBP7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Tpd52Q62393 224 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 U2af1l4Q8BGJ9 220 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Rps6kb1Q8BSK8 525 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Sept8Q8CHH9 429 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ifih1Q8R5F7 1025 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Gm5934D3Z4U6 212 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Casp8O89110 480 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ccdc153P0C7Q1 202 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Eef2P58252 858 aaKnown RBP7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Pde1bQ01065 535 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 SpopQ6ZWS8 374 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Pnpla2Q8BJ56 486 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Rab11fip4Q8BQP8 635 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ubac1Q8VDI7 409 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Stag1Q9D3E6 1258 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Tsc1Q9EP53 1161 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ccdc33Q3ULW6 985 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Serpinb1cQ5SV42 375 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ncoa7Q6DFV7 943 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Slc51bQ80WK2 128 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Znf18Q810A1 556 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Palm2Q8BR92 376 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Krt222Q8CCX5 294 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 NsmfQ99NF2 532 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Polr3cQ9D483 533 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Irs4Q9Z0Y7 1216 aa7.1□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Slit2Q9R1B9 1521 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Sptlc2P97363 560 aaKnown RBP7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Leo1Q5XJE5 667 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Nlrp9aQ66X03 949 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Ccdc154Q6RUT8 657 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Traf3ip3Q8C0G2 513 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Zswim4Q8C7B8 1101 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Tshz3Q8CGV9 1081 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Hexim1Q8R409 356 aaKnown RBP7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Vps16Q920Q4 839 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Tsnaxip1Q99P25 704 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 BlvraQ9CY64 295 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Eef1bO70251 225 aaKnown RBP7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Krt4P07744 525 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Slc12a2P55012 1205 aa7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Patl1Q3TC46 770 aaKnown RBP7.09□□□□□ -1.27
Ube4a-201ENSMUST00000117506 Gm5935Q497S0 212 aa7.09□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms