RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 Slc39a2G3X943 309 aa18.42■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Klrk1O54709 232 aa18.42■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Psmb7P70195 277 aa18.42■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Cdca8Q8BHX3 289 aa18.42■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Osbpl2Q8BX94 484 aa18.42■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Ttc8Q8VD72 515 aa18.42■□□□□ 0.54
Ubp1-202ENSMUST00000084885 4921524L21RikQ9D5T2 438 aa18.42■□□□□ 0.54
Ubp1-202ENSMUST00000084885 DohhA0A1Y7VJ29 135 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Casp12O08736 419 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 LrmpQ60664 539 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Mtss1lQ6P9S0 715 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Jade2Q6ZQF7 829 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 CoblQ5NBX1 1337 aaKnown RBP18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Mageb2A2AHM0 380 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Otud7bB2RUR8 840 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Nfxl1E9Q8I7 918 aaKnown RBP18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Parp1P11103 1013 aaKnown RBP18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Ftl1P29391 183 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Hvcn1Q3U2S8 269 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Taf1dQ9D4V4 322 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Pex3Q9QXY9 372 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Ssc5dQ8BV57 1371 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Usp49Q6P9L4 685 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 AmfrQ9R049 643 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Epb41l3Q9WV92 929 aa18.41■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Skor2A7M7C7 1008 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 U2af2P26369 475 aaKnown RBP18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Kcnj4P52189 445 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 SnrkQ8VDU5 748 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Ttll1Q91V51 423 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Sycp2lA0A0M3U1B0 842 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Siah1aP61092 282 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Igbp1Q61249 340 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Enox2Q8R0Z2 598 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Yeats4Q9CR11 227 aaKnown RBP18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Robo1O89026 1612 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Ccdc78D3Z5T1 437 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 ZyxQ62523 564 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 PigsQ6PD26 555 aaKnown RBP18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Hirip3Q8BLH7 601 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Lmbrd1Q8K0B2 537 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Hexim1Q8R409 356 aaKnown RBP18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Washc1Q8VDD8 475 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Nrbp1Q99J45 535 aa18.4■□□□□ 0.54
Ubp1-202ENSMUST00000084885 Lrrc32G3XA59 663 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Flot1O08917 428 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 IqcgQ80W32 419 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Skor1Q8BX46 964 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Brms1Q99N20 246 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Cabp5Q9JLK3 173 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Hs6st3Q9QYK4 470 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Phlpp1Q8CHE4 1687 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Usp17lbE9Q9U0 468 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Cep135Q6P5D4 1140 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Brd2Q7JJ13 798 aaKnown RBP18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Exoc1Q8R3S6 894 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Trex1Q91XB0 314 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Knop1Q9Z2Q2 478 aaKnown RBP18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Frmd7A2AD83 703 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Tbc1d9bQ5SVR0 1263 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Epha10Q8BYG9 1007 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 CnstQ8CBC4 711 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Pkd2l2Q9JLG4 621 aa18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Hic2Q9JLZ6 619 aaKnown RBP18.39■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Pcif1P59114 706 aa18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Tmem39bQ810L4 492 aa18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Mei1Q9D4I2 1268 aa18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Tdrd3Q91W18 743 aaKnown RBP18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Ssr1Q9CY50 286 aaKnown RBP18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Psmd14O35593 310 aa18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Grin1P35438 938 aa18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Kif5bQ61768 963 aa18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Tex2Q6ZPJ0 1128 aaKnown RBP18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Arhgef6Q8K4I3 771 aa18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Ubxn8Q9QZ49 277 aa18.38■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Gli3Q61602 1583 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 PcQ05920 1178 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Lins1Q3U1D0 764 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Mcm7Q61881 719 aaKnown RBP18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Znf771Q8BJ90 317 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 GlmnQ8BZM1 596 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Ddx27Q921N6 760 aaKnown RBP18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Nop2Q922K7 793 aaKnown RBP18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Nap1l5Q9JJF0 156 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Gm7356A0A087WSA6 508 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Clec11aO88200 328 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Ubxn2bQ0KL01 331 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 AdnpQ9Z103 1108 aaKnown RBP18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Akap11E9Q777 1895 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Kcnb2A6H8H5 907 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Rhpn1Q61085 643 aa18.37■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Gm5624F6ZZG8 207 aa18.36■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Stim2P83093 746 aa18.36■□□□□ 0.53
Ubp1-202ENSMUST00000084885 WaplQ65Z40 1200 aaKnown RBP18.36■□□□□ 0.53
Ubp1-202ENSMUST00000084885 GlyctkQ8QZY2 523 aa18.36■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Pramel3A2AHA7 463 aa18.36■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Gm7903A2AWL1 463 aa18.36■□□□□ 0.53
Ubp1-202ENSMUST00000084885 AV320801A2AWL3 467 aa18.36■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Gm15023L7MUB4 467 aa18.36■□□□□ 0.53
Ubp1-202ENSMUST00000084885 Exoc8Q6PGF7 716 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms