RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Tfip11Q9ERA6 838 aaKnown RBP20.17■□□□□ 0.82
Trim54-201ENSMUST00000013771 Ddx4Q61496 702 aa20.16■□□□□ 0.82
Trim54-201ENSMUST00000013771 Recql4Q75NR7 1216 aaKnown RBP20.16■□□□□ 0.82
Trim54-201ENSMUST00000013771 PhkbQ7TSH2 1085 aa20.16■□□□□ 0.82
Trim54-201ENSMUST00000013771 Cracr2bQ80ZJ8 394 aa20.16■□□□□ 0.82
Trim54-201ENSMUST00000013771 Ptcd2Q8R3K3 381 aaKnown RBP20.16■□□□□ 0.82
Trim54-201ENSMUST00000013771 BaatQ91X34 420 aa20.16■□□□□ 0.82
Trim54-201ENSMUST00000013771 Ndufv1Q91YT0 464 aa20.16■□□□□ 0.82
Trim54-201ENSMUST00000013771 Spata5Q3UMC0 893 aaKnown RBP20.15■□□□□ 0.82
Trim54-201ENSMUST00000013771 Esyt3Q5DTI8 891 aa20.15■□□□□ 0.82
Trim54-201ENSMUST00000013771 Dock2Q8C3J5 1828 aa20.15■□□□□ 0.82
Trim54-201ENSMUST00000013771 Nploc4P60670 608 aa20.14■□□□□ 0.81
Trim54-201ENSMUST00000013771 Eya3P97480 510 aa20.14■□□□□ 0.81
Trim54-201ENSMUST00000013771 MyrflQ3UN70 904 aa20.14■□□□□ 0.81
Trim54-201ENSMUST00000013771 Scfd1Q8BRF7 639 aaKnown RBP20.14■□□□□ 0.81
Trim54-201ENSMUST00000013771 Kcnq3Q8K3F6 873 aa20.14■□□□□ 0.81
Trim54-201ENSMUST00000013771 Dnajc17Q91WT4 303 aa20.14■□□□□ 0.81
Trim54-201ENSMUST00000013771 Sh2b2Q9JID9 621 aa20.14■□□□□ 0.81
Trim54-201ENSMUST00000013771 Lama3Q61789 3330 aa20.14■□□□□ 0.81
Trim54-201ENSMUST00000013771 Gm36210A0A1B0GS00 229 aa20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Cyp2d10P24456 504 aa20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Lig1P37913 916 aa20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Hs1bp3Q3TC93 395 aa20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Sfi1Q3UZY0 1216 aaKnown RBP20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Rc3h1Q4VGL6 1130 aaKnown RBP20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Filip1lQ6P6L0 1131 aa20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Lmbrd2Q8C561 694 aa20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Znf287Q9EQB9 759 aa20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 Atp8b3Q6UQ17 1335 aa20.13■□□□□ 0.81
Trim54-201ENSMUST00000013771 AU019823E9PUQ3 292 aa20.12■□□□□ 0.81
Trim54-201ENSMUST00000013771 Ecm1Q61508 559 aa20.12■□□□□ 0.81
Trim54-201ENSMUST00000013771 WaplQ65Z40 1200 aaKnown RBP20.12■□□□□ 0.81
Trim54-201ENSMUST00000013771 Zbtb39Q6PDK0 712 aa20.12■□□□□ 0.81
Trim54-201ENSMUST00000013771 Chmp5Q9D7S9 219 aa20.12■□□□□ 0.81
Trim54-201ENSMUST00000013771 Ncor1Q60974 2453 aa20.11■□□□□ 0.81
Trim54-201ENSMUST00000013771 Pramef17A2ASJ1 475 aa20.11■□□□□ 0.81
Trim54-201ENSMUST00000013771 Dennd3A2RT67 1274 aa20.11■□□□□ 0.81
Trim54-201ENSMUST00000013771 Cyp2c29Q64458 490 aa20.11■□□□□ 0.81
Trim54-201ENSMUST00000013771 Gigyf2Q6Y7W8 1291 aaKnown RBP20.11■□□□□ 0.81
Trim54-201ENSMUST00000013771 Trim56Q80VI1 734 aaKnown RBP20.11■□□□□ 0.81
Trim54-201ENSMUST00000013771 Bap1Q99PU7 728 aa20.11■□□□□ 0.81
Trim54-201ENSMUST00000013771 Scnn1bQ9WU38 638 aa20.11■□□□□ 0.81
Trim54-201ENSMUST00000013771 Ppp1r9aH3BJD6 1292 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 NfiaQ02780 532 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Olfr118Q7TRJ6 321 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Fbxo28Q8BIG4 368 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Brf1Q8CFK2 676 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Ankrd54Q91WK7 299 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Maged1Q9QYH6 775 aaKnown RBP20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Hmgcs2P54869 508 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Miga1Q4QQM5 600 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Fez1Q8K0X8 392 aa20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 Pspc1Q8R326 523 aaKnown RBP20.1■□□□□ 0.81
Trim54-201ENSMUST00000013771 DcxO88809 366 aa20.09■□□□□ 0.81
Trim54-201ENSMUST00000013771 NapbP28663 298 aa20.09■□□□□ 0.81
Trim54-201ENSMUST00000013771 Lpar1P61793 364 aa20.09■□□□□ 0.81
Trim54-201ENSMUST00000013771 Glra4Q61603 456 aa20.09■□□□□ 0.81
Trim54-201ENSMUST00000013771 Swap70Q6A028 585 aaKnown RBP20.09■□□□□ 0.81
Trim54-201ENSMUST00000013771 Mxra8Q9DBV4 442 aa20.09■□□□□ 0.81
Trim54-201ENSMUST00000013771 SerhlQ9EPB5 311 aa20.09■□□□□ 0.81
Trim54-201ENSMUST00000013771 Bcar3Q9QZK2 820 aa20.09■□□□□ 0.81
Trim54-201ENSMUST00000013771 PtpreP49446 699 aa20.08■□□□□ 0.8
Trim54-201ENSMUST00000013771 Atl3Q91YH5 541 aa20.08■□□□□ 0.8
Trim54-201ENSMUST00000013771 Akap8Q9DBR0 687 aaKnown RBP20.08■□□□□ 0.8
Trim54-201ENSMUST00000013771 Stk3Q9JI10 497 aa20.08■□□□□ 0.8
Trim54-201ENSMUST00000013771 Znf638Q61464 1960 aaKnown RBP20.07■□□□□ 0.8
Trim54-201ENSMUST00000013771 Stat3P42227 770 aaKnown RBP20.07■□□□□ 0.8
Trim54-201ENSMUST00000013771 Ttc12Q8BW49 704 aa20.07■□□□□ 0.8
Trim54-201ENSMUST00000013771 Nup133Q8R0G9 1155 aa20.07■□□□□ 0.8
Trim54-201ENSMUST00000013771 Tdrd3Q91W18 743 aaKnown RBP20.07■□□□□ 0.8
Trim54-201ENSMUST00000013771 GraspQ9JJA9 392 aa20.07■□□□□ 0.8
Trim54-201ENSMUST00000013771 BcrQ6PAJ1 1270 aa20.06■□□□□ 0.8
Trim54-201ENSMUST00000013771 Armcx1Q9CX83 456 aa20.06■□□□□ 0.8
Trim54-201ENSMUST00000013771 Ftsj3Q9DBE9 838 aaKnown RBP20.06■□□□□ 0.8
Trim54-201ENSMUST00000013771 Cyp46a1Q9WVK8 500 aa20.06■□□□□ 0.8
Trim54-201ENSMUST00000013771 Ptpdc1Q6NZK8 747 aa20.05■□□□□ 0.8
Trim54-201ENSMUST00000013771 Senp7Q8BUH8 1037 aa20.05■□□□□ 0.8
Trim54-201ENSMUST00000013771 Osbpl2Q8BX94 484 aa20.05■□□□□ 0.8
Trim54-201ENSMUST00000013771 Q8C5S3 137 aa20.05■□□□□ 0.8
Trim54-201ENSMUST00000013771 Mtmr4Q91XS1 1190 aa20.05■□□□□ 0.8
Trim54-201ENSMUST00000013771 Mettl16Q9CQG2 553 aaKnown RBP20.05■□□□□ 0.8
Trim54-201ENSMUST00000013771 Ccdc146E9Q9F7 977 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 Slc1a4O35874 532 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 Sept4P28661 478 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 Traf1P39428 409 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 DnerQ8JZM4 737 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 Bst2Q8R2Q8 172 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 Adam1bQ8R534 806 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 Ttll1Q91V51 423 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 Cndp2Q9D1A2 475 aaKnown RBP20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 Efcc1Q9JJF6 558 aa20.04■□□□□ 0.8
Trim54-201ENSMUST00000013771 E030030I06RikJ3QML9 246 aa20.03■□□□□ 0.8
Trim54-201ENSMUST00000013771 Pgk2P09041 417 aa20.03■□□□□ 0.8
Trim54-201ENSMUST00000013771 OplahQ8K010 1288 aa20.03■□□□□ 0.8
Trim54-201ENSMUST00000013771 Bmp2kQ91Z96 1138 aa20.03■□□□□ 0.8
Trim54-201ENSMUST00000013771 AV320801A2AWL3 467 aa20.02■□□□□ 0.8
Trim54-201ENSMUST00000013771 Gm15023L7MUB4 467 aa20.02■□□□□ 0.8
Trim54-201ENSMUST00000013771 Copb2O55029 905 aa20.02■□□□□ 0.8
Trim54-201ENSMUST00000013771 Usp53P15975 1069 aa20.02■□□□□ 0.8
Trim54-201ENSMUST00000013771 Tph1P17532 447 aa20.02■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms