RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Gprin1Q3UNH4 932 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Znf697Q569E7 569 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Grm4Q68EF4 912 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Epha10Q8BYG9 1007 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Fam83aQ8K2P2 436 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Dppa3Q8QZY3 150 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 ZwintQ9CQU5 252 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Cep89Q9CZX2 791 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Inpp4aQ9EPW0 939 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Gpaa1Q9WTK3 621 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Stk39Q9Z1W9 556 aa17.06■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Gm30191A0A0U1RNT7 187 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 MycnP03966 462 aaKnown RBP17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Lilrb3P97484 841 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Sap30bpQ02614 308 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Armc2Q3URY6 854 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Ttbk2Q3UVR3 1243 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Ankrd13cQ3UX43 541 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Mdh1bQ5F204 500 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Clca4aQ6Q473 924 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Vgll2Q8BGW8 322 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 CerkQ8K4Q7 531 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Lrrc2Q8VDB8 371 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 ArcQ9WV31 396 aa17.05■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Tbc1d8bA3KGB4 1114 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Mboat4P0C7A3 435 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Sfi1Q3UZY0 1216 aaKnown RBP17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Kctd1Q5M956 257 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Mre11Q61216 706 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Nlgn2Q69ZK9 836 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Secisbp2lQ6A098 1086 aaKnown RBP17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 RubcnQ80U62 956 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Zfp113Q8C689 439 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Terf2ipQ91VL8 393 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Gm5114W4VSN8 858 aa17.04■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Zscan20B2KFW1 1030 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Gm44503E9PYU5 387 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 TrdnE9Q9K5 693 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Nfil3O08750 462 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Copb2O55029 905 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Ddx49Q4FZF3 480 aaKnown RBP17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Galnt17Q7TT15 598 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Tcp11l1Q8BTG3 509 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 RadxQ8C779 850 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Dnaaf4Q8R368 420 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Stx6Q9JKK1 255 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Tob2Q9JM55 345 aa17.03■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Mms22lB1AUR6 1238 aa17.02■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Arl14Q3SXC5 192 aa17.02■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Cnksr2Q80YA9 1032 aa17.02■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Armc6Q8BNU0 468 aa17.02■□□□□ 0.32
Ercc1-201ENSMUST00000003645 MyripQ8K3I4 856 aa17.02■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Defb15Q8R2I5 79 aa17.02■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Wasf1Q8R5H6 559 aa17.02■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Usp14Q9JMA1 493 aaKnown RBP17.02■□□□□ 0.32
Ercc1-201ENSMUST00000003645 Ulk4Q3V129 1303 aa17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Cfap99A0A140LIX9 648 aa17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Pfkfb3A7UAK5 555 aa17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Rasa3Q60790 834 aa17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Ccdc178Q8CDV0 866 aa17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Slc18a1Q8R090 521 aa17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Ero1bQ8R2E9 467 aa17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Rbm19Q8R3C6 952 aaKnown RBP17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Celf2Q9Z0H4 508 aaKnown RBP17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Psmd10Q9Z2X2 231 aa17.02■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Rexo5D3YW29 759 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Oog1E9Q5G7 496 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 LyarQ08288 388 aaKnown RBP17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Sh2d1b2Q45HK4 132 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Stxbp3Q60770 592 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Dcaf15Q6PFH3 600 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Bri3bpQ8BXV2 253 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 MslnlQ8C160 685 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Plcg2Q8CIH5 1265 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Bst2Q8R2Q8 172 aa17.01■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Myh7bA2AQP0 1941 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Cyp3a25O09158 503 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Mx1P09922 631 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 OatP29758 439 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Rbm46P86049 533 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 GabpaQ00422 454 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Cpa2Q504N0 417 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Slain1Q68FF7 579 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Ccdc82Q6PG04 518 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Ano1Q8BHY3 960 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Il31raQ8K5B1 716 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Srgap1Q91Z69 1062 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Rfc4Q99J62 364 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 NaspQ99MD9 773 aaKnown RBP17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Bcs1lQ9CZP5 418 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 EhhadhQ9DBM2 718 aa17■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Skint3A7TZF0 458 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Zbtb21E9Q444 1094 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 FlgP11088 336 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Serpinb2P12388 415 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Traf1P39428 409 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Nap1l2P51860 460 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Vmn1r209Q5NC97 312 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 MycbpapQ5SUV2 932 aa16.99■□□□□ 0.31
Ercc1-201ENSMUST00000003645 Atp13a3Q5XF89 1219 aa16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms