RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W PCI8P40512 444 aa2.24□□□□□ -2.05
SEC16YPL085W LIA1P47120 325 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W MET13P53128 600 aa2.24□□□□□ -2.05
SEC16YPL085W SLI1P53304 468 aa2.24□□□□□ -2.05
SEC16YPL085W NRD1P53617 575 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05 RIP-Chip
SEC16YPL085W UBX5Q06682 500 aa2.24□□□□□ -2.05
SEC16YPL085W SPO75Q07798 868 aa2.24□□□□□ -2.05
SEC16YPL085W YOS9Q99220 542 aa2.24□□□□□ -2.05
SEC16YPL085W YMR084WA2P2R3 262 aa2.24□□□□□ -2.05
SEC16YPL085W ENO1P00924 437 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W MOD5P07884 428 aa2.24□□□□□ -2.05
SEC16YPL085W ICL1P28240 557 aaPredicted RBP2.24□□□□□ -2.05
SEC16YPL085W CTS1P29029 562 aa2.24□□□□□ -2.05
SEC16YPL085W PIN4P34217 668 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
SEC16YPL085W YOR062CP36025 268 aa2.24□□□□□ -2.05
SEC16YPL085W YBP1P38315 674 aa2.24□□□□□ -2.05
SEC16YPL085W YBR287WP38355 427 aa2.24□□□□□ -2.05
SEC16YPL085W CBR1P38626 284 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W TRS85P46944 698 aa2.24□□□□□ -2.05
SEC16YPL085W PXR1P53335 271 aaPredicted RBP2.24□□□□□ -2.05
SEC16YPL085W YNR068CP53754 272 aa2.24□□□□□ -2.05
SEC16YPL085W YDL129WQ07555 291 aa2.24□□□□□ -2.05
SEC16YPL085W NSE1Q07913 336 aa2.24□□□□□ -2.05
SEC16YPL085W STB3Q12427 513 aa2.24□□□□□ -2.05
SEC16YPL085W GFD2P25370 566 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W OXP1P28273 1286 aa2.24□□□□□ -2.05
SEC16YPL085W URA7P28274 579 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W OAR1P35731 278 aa2.24□□□□□ -2.05
SEC16YPL085W ADD66P36040 267 aa2.24□□□□□ -2.05
SEC16YPL085W PAM1P37304 830 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W YBR238CP38330 731 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W DSS1P39112 969 aa2.24□□□□□ -2.05
SEC16YPL085W TOS3P43637 560 aa2.24□□□□□ -2.05
SEC16YPL085W BIR1P47134 954 aa2.24□□□□□ -2.05
SEC16YPL085W COS10P52924 374 aa2.24□□□□□ -2.05
SEC16YPL085W MZM1Q03429 123 aaPredicted RBP2.24□□□□□ -2.05
SEC16YPL085W RTN1Q04947 295 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W EAF1Q06337 982 aa2.24□□□□□ -2.05
SEC16YPL085W RSC3Q06639 885 aa2.24□□□□□ -2.05
SEC16YPL085W SLP1Q12232 587 aa2.24□□□□□ -2.05
SEC16YPL085W FBA1P14540 359 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W CDC15P27636 974 aa2.24□□□□□ -2.05
SEC16YPL085W SLA2P33338 968 aa2.24□□□□□ -2.05
SEC16YPL085W BCH2P36122 765 aa2.24□□□□□ -2.05
SEC16YPL085W SPF1P39986 1215 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W PHO86P46956 311 aa2.24□□□□□ -2.05
SEC16YPL085W TEP1P53916 434 aa2.24□□□□□ -2.05
SEC16YPL085W YNL040WP53960 456 aaPredicted RBP2.24□□□□□ -2.05
SEC16YPL085W DOT1Q04089 582 aaKnown RBP2.24□□□□□ -2.05
SEC16YPL085W RNH1Q04740 348 aa2.24□□□□□ -2.05
SEC16YPL085W FAR8Q05040 523 aa2.24□□□□□ -2.05
SEC16YPL085W SGT1Q08446 395 aa2.24□□□□□ -2.05
SEC16YPL085W BUD7Q08754 746 aa2.24□□□□□ -2.05
SEC16YPL085W SIS1P25294 352 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W RSC6P25632 483 aa2.23□□□□□ -2.05
SEC16YPL085W HYM1P32464 399 aa2.23□□□□□ -2.05
SEC16YPL085W LIP5P32875 414 aa2.23□□□□□ -2.05
SEC16YPL085W LOT5P34234 306 aa2.23□□□□□ -2.05
SEC16YPL085W PSY4P38193 441 aa2.23□□□□□ -2.05
SEC16YPL085W ILV3P39522 585 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W EAF5P39995 279 aa2.23□□□□□ -2.05
SEC16YPL085W MDJ2P42834 146 aa2.23□□□□□ -2.05
SEC16YPL085W MPS2P53159 387 aa2.23□□□□□ -2.05
SEC16YPL085W MTM1P53320 366 aa2.23□□□□□ -2.05
SEC16YPL085W GAD1Q04792 585 aa2.23□□□□□ -2.05
SEC16YPL085W LCB5Q06147 687 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W YPR172WQ06608 200 aa2.23□□□□□ -2.05
SEC16YPL085W YKL033W-AQ86ZR7 236 aa2.23□□□□□ -2.05
SEC16YPL085W RPP1AP05318 106 aaPredicted RBP2.23□□□□□ -2.05
SEC16YPL085W CBP1P07252 654 aa2.23□□□□□ -2.05
SEC16YPL085W MCM2P29469 868 aa2.23□□□□□ -2.05
SEC16YPL085W GPI10P30777 616 aa2.23□□□□□ -2.05
SEC16YPL085W CAF4P36130 643 aa2.23□□□□□ -2.05
SEC16YPL085W RFS1P38234 210 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W SHG1P38337 142 aa2.23□□□□□ -2.05
SEC16YPL085W KIC1P38692 1080 aa2.23□□□□□ -2.05
SEC16YPL085W SMF2P38778 549 aa2.23□□□□□ -2.05
SEC16YPL085W SMB1P40018 196 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W FIR1P40020 876 aa2.23□□□□□ -2.05
SEC16YPL085W COA1P40452 197 aa2.23□□□□□ -2.05
SEC16YPL085W EFM5P53200 248 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W NNF2P53253 936 aa2.23□□□□□ -2.05
SEC16YPL085W BOP3P53958 396 aa2.23□□□□□ -2.05
SEC16YPL085W EBS1Q03466 884 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W ACL4Q03771 387 aa2.23□□□□□ -2.05
SEC16YPL085W HPT1Q04178 221 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W ROY1Q04847 553 aa2.23□□□□□ -2.05
SEC16YPL085W ECM38Q05902 660 aaPredicted RBP2.23□□□□□ -2.05
SEC16YPL085W RPN8Q08723 338 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W APC11Q12157 165 aa2.23□□□□□ -2.05
SEC16YPL085W YLR462WO13556 202 aa2.23□□□□□ -2.05
SEC16YPL085W CCP1P00431 361 aa2.23□□□□□ -2.05
SEC16YPL085W CAR1P00812 333 aaKnown RBP2.23□□□□□ -2.05
SEC16YPL085W ATP4P05626 244 aa2.23□□□□□ -2.05
SEC16YPL085W CDC26P14724 124 aa2.23□□□□□ -2.05
SEC16YPL085W HOP1P20050 605 aa2.23□□□□□ -2.05
SEC16YPL085W SGF29P25554 259 aa2.23□□□□□ -2.05
SEC16YPL085W PHA2P32452 334 aa2.23□□□□□ -2.05
SEC16YPL085W LAS1P36146 502 aaPredicted RBP2.23□□□□□ -2.05
SEC16YPL085W ROT2P38138 954 aa2.23□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 101.2 ms