RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 CATIPQ7Z7H3 387 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 HSCBQ8IWL3 235 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 MTA3Q9BTC8 594 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
PHGDH-218ENST00000641491 UNCXA6NJT0 531 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 USP17L5A8MUK1 530 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 FGRP09769 529 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 MCM2P49736 904 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 EVX2Q03828 476 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 STOX1Q6ZVD7 989 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 CHST3Q7LGC8 479 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-218ENST00000641491 CHMP4CQ96CF2 233 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 ZKSCAN3Q9BRR0 538 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 DNAJC18Q9H819 358 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 ZSWIM6Q9HCJ5 1215 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 INCENPQ9NQS7 918 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 ZSWIM5Q9P217 1185 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 LAMA4Q16363 1823 aa15.19■□□□□ 0.02
PHGDH-218ENST00000641491 BECN1Q14457 450 aa15.18■□□□□ 0.02
PHGDH-218ENST00000641491 Q6ZUG5 572 aa15.18■□□□□ 0.02
PHGDH-218ENST00000641491 NOL8Q76FK4 1167 aaKnown RBP15.18■□□□□ 0.02
PHGDH-218ENST00000641491 ZKSCAN4Q969J2 545 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-218ENST00000641491 SLC10A4Q96EP9 437 aa15.18■□□□□ 0.02
PHGDH-218ENST00000641491 BEGAINQ9BUH8 593 aa15.18■□□□□ 0.02
PHGDH-218ENST00000641491 ELP3Q9H9T3 547 aa15.18■□□□□ 0.02
PHGDH-218ENST00000641491 TCP11L1Q9NUJ3 509 aa15.18■□□□□ 0.02
PHGDH-218ENST00000641491 SLC12A7Q9Y666 1083 aa15.18■□□□□ 0.02
PHGDH-218ENST00000641491 CDK5RAP2Q96SN8 1893 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 SMIM22K7EJ46 135 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 USP2O75604 605 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-218ENST00000641491 HSP90AA1P07900 732 aaKnown RBP15.17■□□□□ 0.02
PHGDH-218ENST00000641491 INPP5BP32019 993 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 USP14P54578 494 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 HUNKP57058 714 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 MAP3K10Q02779 954 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 VGLL4Q14135 290 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 SEPT2Q15019 361 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 NOL9Q5SY16 702 aaKnown RBP15.17■□□□□ 0.02
PHGDH-218ENST00000641491 DLK2Q6UY11 383 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 DGKHQ86XP1 1220 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHGDH-218ENST00000641491 CEP95Q96GE4 821 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 TTC14Q96N46 770 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 LRRC2Q9BYS8 371 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 MTMR7Q9Y216 660 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 TAF6LQ9Y6J9 622 aa15.17■□□□□ 0.02
PHGDH-218ENST00000641491 UBE2Q2LH0YL09 131 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 SH2B2O14492 632 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-218ENST00000641491 CALM1P0DP23 149 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 CALM2P0DP24 149 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 CALM3P0DP25 149 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 TOP1P11387 765 aaKnown RBP15.16■□□□□ 0.02
PHGDH-218ENST00000641491 CPA1P15085 419 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 ECE1P42892 770 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 IKQ13123 557 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-218ENST00000641491 CPLX2Q6PUV4 134 aaKnown RBP15.16■□□□□ 0.02
PHGDH-218ENST00000641491 CYB5R4Q7L1T6 521 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 NUP133Q8WUM0 1156 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 BRF1Q92994 677 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 TCEANC2Q96MN5 208 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 ZNF112Q9UJU3 913 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 FZD1Q9UP38 647 aa15.16■□□□□ 0.02
PHGDH-218ENST00000641491 GOLGA8BA8MQT2 603 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 PHF20L1A8MW92 1017 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 KIF5BP33176 963 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 MAP3K11Q16584 847 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 CCDC96Q2M329 555 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 ERO1BQ86YB8 467 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 CTCFLQ8NI51 663 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-218ENST00000641491 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 NYAP2Q9P242 653 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 ZHX2Q9Y6X8 837 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 PAPPA2Q9BXP8 1791 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 PDE4DIPQ5VU43 2346 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 SSC5DA1L4H1 1573 aa15.15■□□□□ 0.02
PHGDH-218ENST00000641491 KLF18A0A0U1RQI7 1052 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 TRIM75PA6NK02 468 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 DHX16O60231 1041 aaKnown RBP15.14■□□□□ 0.01
PHGDH-218ENST00000641491 SLURP2P0DP57 97 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 EEF2P13639 858 aaKnown RBP15.14■□□□□ 0.01
PHGDH-218ENST00000641491 PTPRAP18433 802 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 LIFRP42702 1097 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 ZNF157P51786 506 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-218ENST00000641491 PPATQ06203 517 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 ZYXQ15942 572 aaKnown RBP15.14■□□□□ 0.01
PHGDH-218ENST00000641491 LRRC47Q8N1G4 583 aaKnown RBP15.14■□□□□ 0.01
PHGDH-218ENST00000641491 ENAHQ8N8S7 591 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-218ENST00000641491 ZNF280CQ8ND82 737 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 PNMA1Q8ND90 353 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 CAPNS2Q96L46 248 aa15.14■□□□□ 0.01
PHGDH-218ENST00000641491 CTDP1Q9Y5B0 961 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-218ENST00000641491 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
PHGDH-218ENST00000641491 GOLGA8AA7E2F4 631 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms